RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 WDR64B1ANS9 1081 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 COPEO14579 308 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 MEFVO15553 781 aaPredicted RBP8.45□□□□□ -1.06
CIITA-201ENST00000324288 MLH1P40692 756 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 MTERF2Q49AM1 385 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 ZBTB10Q96DT7 871 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 UBTFL6P0CB48 400 aaPredicted RBP8.45□□□□□ -1.06
CIITA-201ENST00000324288 AGR3Q8TD06 166 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 TMEM60Q9H2L4 133 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 PAIP2BQ9ULR5 123 aaKnown RBP8.45□□□□□ -1.06
CIITA-201ENST00000324288 H0YCG3 227 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 TRIM37O94972 964 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 KRT75O95678 551 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 KRT17Q04695 432 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 CTTNQ14247 550 aaKnown RBP8.45□□□□□ -1.06
CIITA-201ENST00000324288 TRIM25Q14258 630 aaKnown RBP8.45□□□□□ -1.06
CIITA-201ENST00000324288 SLC30A9Q6PML9 568 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 SRLQ86TD4 932 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 P2RX5Q93086 422 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 MS4A14Q96JA4 679 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 USP21Q9UK80 565 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 L3MBTL1Q9Y468 752 aa8.45□□□□□ -1.06
CIITA-201ENST00000324288 ARHGAP10A1A4S6 786 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 AP2B1P63010 937 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 PPM1NQ8N819 430 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 WDR48Q8TAF3 677 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 CARMIL3Q8ND23 1372 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 ANXA13P27216 316 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 KCTD2Q14681 263 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 MMTAG2Q9BU76 263 aaKnown RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 SOS2Q07890 1332 aaPredicted RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 FGAP02671 866 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 KRT8P05787 483 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 ZNF467Q7Z7K2 595 aaPredicted RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 PPHLN1Q8NEY8 458 aaKnown RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 TM6SF1Q9BZW5 370 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 AP5M1Q9H0R1 490 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 SERPING1P05155 500 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 PSMA2P25787 234 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 TNFAIP1Q13829 316 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 SLC26A7Q8TE54 656 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 RNF139Q8WU17 664 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 VPS11Q9H270 941 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 TTI1O43156 1089 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 EFTUD2Q15029 972 aaKnown RBP eCLIP8.44□□□□□ -1.06
CIITA-201ENST00000324288 SH2D3CQ8N5H7 860 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 NLRP4Q96MN2 994 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 LRRC4Q9HBW1 653 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 ATP6V1B1P15313 513 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 ARL4AP40617 200 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 ADCY2Q08462 1091 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 PPP6R3Q5H9R7 873 aaPredicted RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 DEPDC1Q5TB30 811 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 B4GALNT2Q8NHY0 566 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 MIS12Q9H081 205 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 E2F8A0AVK6 867 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 KCNA3P22001 575 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 BBS5Q8N3I7 341 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 C6orf203Q9P0P8 240 aaPredicted RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 AFF4Q9UHB7 1163 aaKnown RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 ZBED1O96006 694 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 RBBP7Q16576 425 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 UBE2SQ16763 222 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 NSUN7Q8NE18 718 aaKnown RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 ASZ1Q8WWH4 475 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 PAGE5Q96GU1 130 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 HEMGNQ9BXL5 484 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 DDAH1O94760 285 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 OCM2P0CE71 109 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 OCMP0CE72 109 aaPredicted RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 ATP5JP18859 108 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 DYNLL1P63167 89 aaKnown RBP8.44□□□□□ -1.06
CIITA-201ENST00000324288 CHRNDQ07001 517 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 SLC12A6Q9UHW9 1150 aa8.44□□□□□ -1.06
CIITA-201ENST00000324288 A0A1W2PQ27 194 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 A0A1W2PQ64 194 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 A0A1W2PQD8 194 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ELF1P32519 619 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 IL13P35225 146 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ARHGDIAP52565 204 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 GFPT1Q06210 699 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 RASSF3Q86WH2 238 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 OLFM3Q96PB7 478 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ADAM33Q9BZ11 813 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 ADNPQ9H2P0 1102 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 TLR7Q9NYK1 1049 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 APOBEC2Q9Y235 224 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 MFAP3LO75121 409 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 DMPKQ09013 629 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 NUP93Q8N1F7 819 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 DYNLL2Q96FJ2 89 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
CIITA-201ENST00000324288 CFAP43Q8NDM7 1665 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 CEP55Q53EZ4 464 aa8.43□□□□□ -1.06
CIITA-201ENST00000324288 C1orf228Q6PIY5 440 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms