RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 MMTAG2Q9BU76 263 aaKnown RBP18.56■□□□□ 0.56
LRRC42-201ENST00000319223 AGO3Q9H9G7 860 aaKnown RBP18.56■□□□□ 0.56
LRRC42-201ENST00000319223 GINS2Q9Y248 185 aa18.56■□□□□ 0.56
LRRC42-201ENST00000319223 GPR32O75388 356 aa18.55■□□□□ 0.56
LRRC42-201ENST00000319223 ZSCAN22P10073 491 aaPredicted RBP18.55■□□□□ 0.56
LRRC42-201ENST00000319223 FXR1P51114 621 aaKnown RBP eCLIP18.55■□□□□ 0.56
LRRC42-201ENST00000319223 KIZQ2M2Z5 673 aa18.55■□□□□ 0.56
LRRC42-201ENST00000319223 ARL6IP4Q66PJ3 421 aaKnown RBP18.55■□□□□ 0.56
LRRC42-201ENST00000319223 OTUD6AQ7L8S5 288 aa18.55■□□□□ 0.56
LRRC42-201ENST00000319223 TMEM40Q8WWA1 233 aa18.55■□□□□ 0.56
LRRC42-201ENST00000319223 ZBBXA8MT70 800 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 CCT6AP40227 531 aaKnown RBP18.54■□□□□ 0.56
LRRC42-201ENST00000319223 RARRES1P49788 294 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 ERMNQ8TAM6 284 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 DHX33Q9H6R0 707 aaKnown RBP18.54■□□□□ 0.56
LRRC42-201ENST00000319223 ANKEF1Q9NU02 776 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 AKT3Q9Y243 479 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 KDM3AQ9Y4C1 1321 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 F13A1P00488 732 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 RPLP2P05387 115 aaKnown RBP18.54■□□□□ 0.56
LRRC42-201ENST00000319223 TMOD1P28289 359 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 NLRP11P59045 1033 aaKnown RBP18.54■□□□□ 0.56
LRRC42-201ENST00000319223 FOXD4L6Q3SYB3 417 aaPredicted RBP18.54■□□□□ 0.56
LRRC42-201ENST00000319223 FOXD4L3Q6VB84 417 aaPredicted RBP18.54■□□□□ 0.56
LRRC42-201ENST00000319223 OSMRQ99650 979 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 ADAMTS10Q9H324 1103 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 ZDHHC9Q9Y397 364 aa18.54■□□□□ 0.56
LRRC42-201ENST00000319223 LOXHD1Q8IVV2 1947 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 ARID2Q68CP9 1835 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 M0QZ92 97 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 ACTN1P12814 892 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 MARCKSP29966 332 aaPredicted RBP18.53■□□□□ 0.56
LRRC42-201ENST00000319223 CD52P31358 61 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 BECN1Q14457 450 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 HAUS3Q68CZ6 603 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.53■□□□□ 0.56
LRRC42-201ENST00000319223 TMCO2Q7Z6W1 182 aaPredicted RBP18.53■□□□□ 0.56
LRRC42-201ENST00000319223 KSR1Q8IVT5 923 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 TMEM143Q96AN5 459 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 MAP7D2Q96T17 732 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 IFIH1Q9BYX4 1025 aaKnown RBP18.53■□□□□ 0.56
LRRC42-201ENST00000319223 RAB34Q9BZG1 259 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 XPNPEP1Q9NQW7 623 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 TFIP11Q9UBB9 837 aaKnown RBP18.53■□□□□ 0.56
LRRC42-201ENST00000319223 KIAA1024Q9UPX6 916 aa18.53■□□□□ 0.56
LRRC42-201ENST00000319223 XRCC6P12956 609 aaKnown RBP eCLIP18.52■□□□□ 0.56
LRRC42-201ENST00000319223 GPC3P51654 580 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 POLGP54098 1239 aaPredicted RBP18.52■□□□□ 0.56
LRRC42-201ENST00000319223 WDR5P61964 334 aaKnown RBP18.52■□□□□ 0.56
LRRC42-201ENST00000319223 DEFB103AP81534 67 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 TSHZ1Q6ZSZ6 1077 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 KCNK18Q7Z418 384 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 SEPT8Q92599 483 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 NACC1Q96RE7 527 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 SUCLA2Q9P2R7 463 aaPredicted RBP18.52■□□□□ 0.56
LRRC42-201ENST00000319223 NOC2LQ9Y3T9 749 aaKnown RBP18.52■□□□□ 0.56
LRRC42-201ENST00000319223 SLC4A7Q9Y6M7 1214 aa18.52■□□□□ 0.56
LRRC42-201ENST00000319223 BAIAP3O94812 1187 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 BMP15O95972 392 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 RFC5P40937 340 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 CRYBB1P53674 252 aaPredicted RBP18.52■□□□□ 0.55
LRRC42-201ENST00000319223 IKBKEQ14164 716 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 EMC2Q15006 297 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 KRT79Q5XKE5 535 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 SLC7A3Q8WY07 619 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 PNMA5Q96PV4 448 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 DDX19AQ9NUU7 478 aaKnown RBP18.52■□□□□ 0.55
LRRC42-201ENST00000319223 PPME1Q9Y570 386 aa18.52■□□□□ 0.55
LRRC42-201ENST00000319223 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.51■□□□□ 0.55
LRRC42-201ENST00000319223 ABHD14A-ACY1A0A1B0GW23 586 aa18.51■□□□□ 0.55
LRRC42-201ENST00000319223 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.51■□□□□ 0.55
LRRC42-201ENST00000319223 PBX2P40425 430 aa18.51■□□□□ 0.55
LRRC42-201ENST00000319223 RHPN2Q8IUC4 686 aa18.51■□□□□ 0.55
LRRC42-201ENST00000319223 PLIN2Q99541 437 aa18.51■□□□□ 0.55
LRRC42-201ENST00000319223 MTIF3Q9H2K0 278 aaKnown RBP18.51■□□□□ 0.55
LRRC42-201ENST00000319223 DAXXQ9UER7 740 aaPredicted RBP18.51■□□□□ 0.55
LRRC42-201ENST00000319223 FBXO2Q9UK22 296 aaPredicted RBP18.51■□□□□ 0.55
LRRC42-201ENST00000319223 DBR1Q9UK59 544 aaKnown RBP18.51■□□□□ 0.55
LRRC42-201ENST00000319223 PADI3Q9ULW8 664 aa18.51■□□□□ 0.55
LRRC42-201ENST00000319223 SQORQ9Y6N5 450 aa18.51■□□□□ 0.55
LRRC42-201ENST00000319223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.5■□□□□ 0.55
LRRC42-201ENST00000319223 E9PMD0 336 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 USO1O60763 962 aaKnown RBP18.5■□□□□ 0.55
LRRC42-201ENST00000319223 CSDE1O75534 798 aaKnown RBP18.5■□□□□ 0.55
LRRC42-201ENST00000319223 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
LRRC42-201ENST00000319223 MUTP22033 750 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 DNM2P50570 870 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 RABGGTBP53611 331 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 ZRSR1Q15695 479 aaKnown RBP18.5■□□□□ 0.55
LRRC42-201ENST00000319223 SPECC1Q5M775 1068 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 PRPF31Q8WWY3 499 aaKnown RBP18.5■□□□□ 0.55
LRRC42-201ENST00000319223 CHAMP1Q96JM3 812 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 CLIC6Q96NY7 704 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 MTRQ99707 1265 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 PTPRSQ13332 1948 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 MYH15Q9Y2K3 1946 aa18.5■□□□□ 0.55
LRRC42-201ENST00000319223 A0A087WZ62 844 aa18.49■□□□□ 0.55
LRRC42-201ENST00000319223 BRD1O95696 1058 aa18.49■□□□□ 0.55
LRRC42-201ENST00000319223 ATP2A2P16615 1042 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms