RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 CCDC68Q9H2F9 335 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 CD209Q9NNX6 404 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 ANGPTL3Q9Y5C1 460 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 PTPRTO14522 1441 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 MT-ND3P03897 115 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 ACTN1P12814 892 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 PSMC5P62195 406 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 PTK2Q05397 1052 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 ACTN3Q08043 901 aaPredicted RBP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 ZMYM1Q5SVZ6 1142 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 RINT1Q6NUQ1 792 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 GSPT2Q8IYD1 628 aaKnown RBP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 MMTAG2Q9BU76 263 aaKnown RBP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 NARFQ9UHQ1 456 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 GFPT2O94808 682 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 HMBSP08397 361 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 EIF3BP55884 814 aaKnown RBP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 HDLBPQ00341 1268 aaKnown RBP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 STXBP2Q15833 593 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 CCHCR1Q8TD31 782 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 TUBB6Q9BUF5 446 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 ZFYVE28Q9HCC9 887 aa14.9□□□□□ -0.02
EDEM3-201ENST00000318130 UBE2TQ9NPD8 197 aaPredicted RBP14.9□□□□□ -0.02
EDEM3-201ENST00000318130 USP17L15C9J2P7 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L13C9JLJ4 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L11C9JVI0 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L18D6R9N7 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L22D6RA61 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L17D6RBQ6 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L19D6RCP7 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L20D6RJB6 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 NSUN2Q08J23 767 aaKnown RBP eCLIP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L24Q0WX57 530 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 KRT80Q6KB66 452 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 USP17L6PQ6QN14 398 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 CFAP36Q96G28 342 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 MAP10Q9P2G4 905 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 ITM2BQ9Y287 266 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 ATP10DQ9P241 1426 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 ABCC12Q96J65 1359 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 GMPSP49915 693 aaPredicted RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 HABP4Q5JVS0 413 aaKnown RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 SLC12A6Q9UHW9 1150 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 EXOC1LA0A1B0GW35 172 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 POLR2BP30876 1174 aaKnown RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 BHMTQ93088 406 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 SAAL1Q96ER3 474 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 DNAJC17Q9NVM6 304 aaKnown RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 HOXC10Q9NYD6 342 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 MOCS2O96007 188 aaPredicted RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 MCAMP43121 646 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 SARM1Q6SZW1 724 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 EPC1Q9H2F5 836 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 PRR23AA6NEV1 266 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 XPOTO43592 962 aaKnown RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 TOM1L1O75674 476 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 MMEP08473 750 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 KDELC2Q7Z4H8 507 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 ST13P4Q8IZP2 240 aaPredicted RBP14.89□□□□□ -0.03
EDEM3-201ENST00000318130 THEM5Q8N1Q8 247 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 AIFM3Q96NN9 605 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 CENPKQ9BS16 269 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 KCNG1Q9UIX4 513 aa14.89□□□□□ -0.03
EDEM3-201ENST00000318130 RSBN1LQ6PCB5 846 aaPredicted RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 ZC3H18Q86VM9 953 aaKnown RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 CLEC10AQ8IUN9 316 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 DRC3Q9H069 523 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 G3BP2Q9UN86 482 aaKnown RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 NME3Q13232 169 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 CCDC17Q96LX7 622 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 NT5C1BQ96P26 610 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 RNF26Q9BY78 433 aaPredicted RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 THAP9Q9H5L6 903 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 PCDHA6Q9UN73 950 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 PCDHA8Q9Y5H6 950 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 USP27XA6NNY8 438 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 DYNC1LI2O43237 492 aaPredicted RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 MMP1P03956 469 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 ADORA2BP29275 332 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 SOX5P35711 763 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 KRT31Q15323 416 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 GRAMD1BQ3KR37 738 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 C6orf118Q5T5N4 469 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 PAGE5Q96GU1 130 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 S100BP04271 92 aaPredicted RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 SERPING1P05155 500 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 STX1BP61266 288 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 CUL1Q13616 776 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 PDCD2Q16342 344 aaPredicted RBP14.88□□□□□ -0.03
EDEM3-201ENST00000318130 MAML1Q92585 1016 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 CCDC138Q96M89 665 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 ACCSQ96QU6 501 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 RNF146Q9NTX7 359 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 LAD1O00515 517 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 MAPK13O15264 365 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 ACSL3O95573 720 aa14.88□□□□□ -0.03
EDEM3-201ENST00000318130 CA4P22748 312 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms