RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TMEM119Q4V9L6 283 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 WASHC2DQ5SRD0 308 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 MIS18BP1Q6P0N0 1132 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TSC22D3Q99576 134 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CTTNBP2NLQ9P2B4 639 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 COASYQ13057 564 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 BIRC2Q13490 618 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SENP1Q9P0U3 644 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 LARSQ9P2J5 1176 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CNOT8Q9UFF9 292 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 STX8Q9UNK0 236 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 IGF2BP3O00425 579 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 MPHOSPH10O00566 681 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 NDC80O14777 642 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 TCEA3O75764 348 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 IL9RQ01113 521 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 PRPF4BQ13523 1007 aaKnown RBP5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ACVR2BQ13705 512 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SESTD1Q86VW0 696 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 NEDD1Q8NHV4 660 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 FBXO25Q8TCJ0 367 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 FAM210AQ96ND0 272 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SLC24A3Q9HC58 644 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 SLC5A4Q9NY91 659 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF652Q9Y2D9 606 aa5.17□□□□□ -1.58
PTPN13-201ENST00000316707 CDH16O75309 829 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 PLCG2P16885 1265 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 HADHBP55084 474 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 LBRQ14739 615 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 NUGGCQ68CJ6 796 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 C11orf63Q6NUN7 778 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 SYDE1Q6ZW31 735 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 IRF2BP2Q7Z5L9 587 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 U2AF1L4Q8WU68 220 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TYW1Q9NV66 732 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 PANK4Q9NVE7 773 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 SNX24Q9Y343 169 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 A6NHS1 94 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 BACH1O14867 736 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 DCTN3O75935 186 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 UBOX5O94941 541 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 UNC5CO95185 931 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TTLL1O95922 423 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 DIXDC1Q155Q3 683 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TRADDQ15628 312 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ENOX2Q16206 610 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 FAM133BQ5BKY9 247 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 FAM47AQ5JRC9 791 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 C12orf60Q5U649 245 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 IRGCQ6NXR0 463 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF571Q7Z3V5 609 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 NSUN4Q96CB9 384 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TMEM237Q96Q45 408 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TRIM31Q9BZY9 425 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 CCDC113Q9H0I3 377 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 NEUROG2Q9H2A3 272 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 RNPEPL1Q9HAU8 725 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ETNK1Q9HBU6 452 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ZDHHC18Q9NUE0 388 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 PCYOX1Q9UHG3 505 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 LRRC42Q9Y546 428 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 CD2APQ9Y5K6 639 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 USH1CQ9Y6N9 552 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 NCANO14594 1321 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ROBO3Q96MS0 1386 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 PHF2O75151 1096 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TCEAL1Q15170 157 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 HLFQ16534 295 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 HYIQ5T013 277 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 RNF43Q68DV7 783 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ECT2Q9H8V3 914 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 EYA4O95677 639 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TNFAIP3P21580 790 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ALDH5A1P51649 535 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 GALCP54803 685 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 KLC1Q07866 573 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 AUHQ13825 339 aaKnown RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 SLC29A2Q14542 456 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 GALNTL6Q49A17 601 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TCERG1LQ5VWI1 586 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 SDCCAG8Q86SQ7 713 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TMEM47Q9BQJ4 181 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 LRMDAQ9H2I8 198 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 AZI2Q9H6S1 392 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 PACSIN2Q9UNF0 486 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 STXBP5LQ9Y2K9 1186 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 L3MBTL1Q9Y468 752 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 CYP19A1P11511 503 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ACADSP16219 412 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 KLRC3Q07444 240 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 CNGA2Q16280 664 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 ACCSLQ4AC99 568 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 TMC4Q7Z404 712 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 RIBC1Q8N443 379 aaPredicted RBP5.16□□□□□ -1.58
PTPN13-201ENST00000316707 SMC1BQ8NDV3 1235 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 DNAJC19Q96DA6 116 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 VCX3BQ9H321 246 aa5.16□□□□□ -1.58
PTPN13-201ENST00000316707 VCX3AQ9NNX9 186 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms