RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CCDC178Q5BJE1 867 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 CBWD3Q5JTY5 395 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 CBWD5Q5RIA9 395 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 PHLDB3Q6NSJ2 640 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 TMC3Q7Z5M5 1100 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 C3orf20Q8ND61 904 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 MAGEC3Q8TD91 643 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 ALG3Q92685 438 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 ARFGAP3Q9NP61 516 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 UBE4BO95155 1302 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 UMODL1Q5DID0 1318 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 TRAPPC3O43617 180 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 NCK2O43639 380 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 EVI5O60447 810 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 GOLGA8HP0CJ92 632 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 ZSCAN26Q16670 478 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 LRIG3Q6UXM1 1119 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 CYP4V2Q6ZWL3 525 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-201ENST00000315544 OGFOD1Q8N543 542 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 CCT6BQ92526 530 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 RUSC1Q9BVN2 902 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 SUCLA2Q9P2R7 463 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-201ENST00000315544 ZNF70Q9UC06 446 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-201ENST00000315544 GOLGA6L4A6NEF3 574 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 F8VZ95 297 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 HSPA8P11142 646 aaKnown RBP8.63□□□□□ -1.03
CNOT4-201ENST00000315544 BCRP11274 1271 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 MGAT5Q09328 741 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 MYBPC2Q14324 1141 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 RRAGBQ5VZM2 374 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 CCDC12Q8WUD4 166 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-201ENST00000315544 PCYOX1Q9UHG3 505 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 GTF2IRD1Q9UHL9 959 aa8.63□□□□□ -1.03
CNOT4-201ENST00000315544 SMCO2A6NFE2 343 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 DNM1LO00429 736 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 MOCS3O95396 460 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 STIM1Q13586 685 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 EMBQ6PCB8 327 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 DTHD1Q6ZMT9 781 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 CYP2W1Q8TAV3 490 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 TGFBRAP1Q8WUH2 860 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 RNF25Q96BH1 459 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 SENP7Q9BQF6 1050 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 NTPCRQ9BSD7 190 aaKnown RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 DHRS4Q9BTZ2 278 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 A0A0G2JLL6 359 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 GFPT2O94808 682 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 SERPING1P05155 500 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 FGFR1P11362 822 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 MMP13P45452 471 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 EIF6P56537 245 aaKnown RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 UBXN1Q04323 297 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 PRRT2Q7Z6L0 340 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 IQCA1Q86XH1 822 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 FAM151AQ8WW52 585 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 PCDHB18PQ96TA0 734 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 DHX36Q9H2U1 1008 aaKnown RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 STIM2Q9P246 746 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 RNF14Q9UBS8 474 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 PDXKO00764 312 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 RAD51CO43502 376 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 TECP42680 631 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 NCKAP1LP55160 1127 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 NONOQ15233 471 aaKnown RBP eCLIP8.62□□□□□ -1.03
CNOT4-201ENST00000315544 SYDE2Q5VT97 1194 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 UBXN4Q92575 508 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 UBAC1Q9BSL1 405 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 DAAM1Q9Y4D1 1078 aa8.62□□□□□ -1.03
CNOT4-201ENST00000315544 OBSL1O75147 1896 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 ANKRD36A6QL64 1941 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 UCHL3P15374 230 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 CASP4P49662 377 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 ZNF132P52740 706 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 HSF5Q4G112 596 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-201ENST00000315544 MFSD5Q6N075 450 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 AMOTL1Q8IY63 956 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 REEP2Q9BRK0 252 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 MXD3Q9BW11 206 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 FAM204AQ9H8W3 233 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-201ENST00000315544 TAS2R14Q9NYV8 317 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 RSPH10B2B2RC85 870 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 USP17L10C9JJH3 530 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 RTN2O75298 545 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 RSPH10BP0C881 870 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 GCFC2P16383 781 aaKnown RBP8.61□□□□□ -1.03
CNOT4-201ENST00000315544 CRKP46108 304 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 ALS2CLQ60I27 953 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 TMCO3Q6UWJ1 677 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 CCDC82Q8N4S0 544 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms