RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CCDC136Q96JN2 1154 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 PLVAPQ9BX97 442 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 AGXT2Q9BYV1 514 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 RC3H2Q9HBD1 1191 aaKnown RBP9.24□□□□□ -0.93
TPM3-203ENST00000312970 PCDHA10Q9Y5I2 948 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 MAFBQ9Y5Q3 323 aaPredicted RBP9.24□□□□□ -0.93
TPM3-203ENST00000312970 ZDBF2Q9HCK1 2354 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 IGSF9BQ9UPX0 1349 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 COL1A2P08123 1366 aa9.24□□□□□ -0.93
TPM3-203ENST00000312970 ADAMTS3O15072 1205 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 GRM6O15303 877 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 REC8O95072 547 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 PSAPP07602 524 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 IFNAR1P17181 557 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 ATP4AP20648 1035 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 CIITAP33076 1130 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 EVCP57679 992 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
TPM3-203ENST00000312970 NFX1Q12986 1120 aaKnown RBP9.23□□□□□ -0.93
TPM3-203ENST00000312970 COL19A1Q14993 1142 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 NTRK3Q16288 839 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 PRR16Q569H4 304 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 NAALADL2Q58DX5 795 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
TPM3-203ENST00000312970 CKAP2LQ8IYA6 745 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 SMAP1Q8IYB5 467 aaPredicted RBP9.23□□□□□ -0.93
TPM3-203ENST00000312970 CMTR2Q8IYT2 770 aaKnown RBP9.23□□□□□ -0.93
TPM3-203ENST00000312970 LINC01599Q8WXQ3 324 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 P2RX5Q93086 422 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 PHKBQ93100 1093 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 FBXL18Q96ME1 805 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 UIMC1Q96RL1 719 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 RNF26Q9BY78 433 aaPredicted RBP9.23□□□□□ -0.93
TPM3-203ENST00000312970 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 SH3GLB2Q9NR46 395 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 TCEAL9Q9UHQ7 104 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 LRFN2Q9ULH4 789 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 PLAGL2Q9UPG8 496 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 FAM50BQ9Y247 325 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 GINS2Q9Y248 185 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 PCDHB7Q9Y5E2 793 aa9.23□□□□□ -0.93
TPM3-203ENST00000312970 ZBTB42B2RXF5 422 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 H3BQ06 376 aaPredicted RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 GPR182O15218 404 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 EPB41L2O43491 1005 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 RPS6KA5O75582 802 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 IL9P15248 144 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 PDIA3P30101 505 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 SARSP49591 514 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 USP11P51784 963 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 CRYBB1P53674 252 aaPredicted RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 PPP1R15BQ5SWA1 713 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 RUFY3Q7L099 469 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 TRMT1LQ7Z2T5 733 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 GJD3Q8N144 294 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 CCDC148Q8NFR7 591 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 SLC26A6Q9BXS9 759 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 TMX1Q9H3N1 280 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 ALG13Q9NP73 1137 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 PLSCR2Q9NRY7 297 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 RGS18Q9NS28 235 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 NRBP2Q9NSY0 501 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 CLDND1Q9NY35 253 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 ST3GAL5Q9UNP4 418 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 NOC2LQ9Y3T9 749 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 SAMM50Q9Y512 469 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 MRPL42Q9Y6G3 142 aaKnown RBP9.22□□□□□ -0.93
TPM3-203ENST00000312970 NID2Q14112 1375 aa9.22□□□□□ -0.93
TPM3-203ENST00000312970 MYO7AQ13402 2215 aa9.21□□□□□ -0.93
TPM3-203ENST00000312970 LOXHD1Q8IVV2 1947 aa9.21□□□□□ -0.93
TPM3-203ENST00000312970 DENND3A2RUS2 1198 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 MAGEB2O15479 319 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 PPFIA3O75145 1194 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 C22orf31O95567 290 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 MMP1P03956 469 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 SSTR3P32745 418 aaPredicted RBP9.21□□□□□ -0.94
TPM3-203ENST00000312970 LTBRP36941 435 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 NLRP5P59047 1200 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 CCT2P78371 535 aaKnown RBP9.21□□□□□ -0.94
TPM3-203ENST00000312970 SSRP1Q08945 709 aaKnown RBP9.21□□□□□ -0.94
TPM3-203ENST00000312970 HYAL1Q12794 435 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 CTC1Q2NKJ3 1217 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 PAN2Q504Q3 1202 aaKnown RBP9.21□□□□□ -0.94
TPM3-203ENST00000312970 SLC24A5Q71RS6 500 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 TRIM22Q8IYM9 498 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 ZNF710Q8N1W2 664 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 METTL13Q8N6R0 699 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 SPPL3Q8TCT6 385 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 PHOX2BQ99453 314 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 RIT2Q99578 217 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 ADAM2Q99965 735 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 IGFLR1Q9H665 355 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 NCOA5Q9HCD5 579 aaKnown RBP9.21□□□□□ -0.94
TPM3-203ENST00000312970 ZSWIM6Q9HCJ5 1215 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 ERVK-5Q9HDB9 667 aa9.21□□□□□ -0.94
TPM3-203ENST00000312970 C1orf112Q9NSG2 853 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms