RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZBTB22O15209 634 aa8.81□□□□□ -1
VPS41-202ENST00000310301 RARBP10826 455 aa8.81□□□□□ -1
VPS41-202ENST00000310301 MESDQ14696 234 aa8.81□□□□□ -1
VPS41-202ENST00000310301 STXBP2Q15833 593 aa8.81□□□□□ -1
VPS41-202ENST00000310301 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
VPS41-202ENST00000310301 RNF207Q6ZRF8 634 aa8.81□□□□□ -1
VPS41-202ENST00000310301 TRMT10CQ7L0Y3 403 aaKnown RBP8.81□□□□□ -1
VPS41-202ENST00000310301 CDKL2Q92772 493 aa8.81□□□□□ -1
VPS41-202ENST00000310301 CNOT6LQ96LI5 555 aaKnown RBP8.81□□□□□ -1
VPS41-202ENST00000310301 FGD4Q96M96 766 aa8.81□□□□□ -1
VPS41-202ENST00000310301 PANK4Q9NVE7 773 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ARHGEF37A1IGU5 675 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SGK1O00141 431 aa8.81□□□□□ -1
VPS41-202ENST00000310301 RASGRF2O14827 1237 aa8.81□□□□□ -1
VPS41-202ENST00000310301 PFKFB2O60825 505 aa8.81□□□□□ -1
VPS41-202ENST00000310301 RWDD2BP57060 319 aa8.81□□□□□ -1
VPS41-202ENST00000310301 PDE1BQ01064 536 aa8.81□□□□□ -1
VPS41-202ENST00000310301 OCA2Q04671 838 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ZMYM1Q5SVZ6 1142 aa8.81□□□□□ -1
VPS41-202ENST00000310301 NUGGCQ68CJ6 796 aa8.81□□□□□ -1
VPS41-202ENST00000310301 OSBPL1AQ9BXW6 950 aa8.81□□□□□ -1
VPS41-202ENST00000310301 NT5C3AQ9H0P0 336 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
VPS41-202ENST00000310301 SLC39A2Q9NP94 309 aa8.81□□□□□ -1
VPS41-202ENST00000310301 ANAPC5Q9UJX4 755 aa8.81□□□□□ -1
VPS41-202ENST00000310301 TNKSO95271 1327 aa8.8□□□□□ -1
VPS41-202ENST00000310301 A0A087WWV3 80 aa8.8□□□□□ -1
VPS41-202ENST00000310301 IKBKBO14920 756 aa8.8□□□□□ -1
VPS41-202ENST00000310301 FTCDO95954 541 aa8.8□□□□□ -1
VPS41-202ENST00000310301 MCF2P10911 925 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TECP42680 631 aa8.8□□□□□ -1
VPS41-202ENST00000310301 STX1BP61266 288 aa8.8□□□□□ -1
VPS41-202ENST00000310301 FKBP1CQ5VVH2 108 aa8.8□□□□□ -1
VPS41-202ENST00000310301 ZNF654Q8IZM8 581 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TUBGCP2Q9BSJ2 902 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TAF1DQ9H5J8 278 aaPredicted RBP8.8□□□□□ -1
VPS41-202ENST00000310301 POLLQ9UGP5 575 aa8.8□□□□□ -1
VPS41-202ENST00000310301 PLAAQ9Y263 795 aa8.8□□□□□ -1
VPS41-202ENST00000310301 FRMPD2Q68DX3 1309 aaPredicted RBP8.8□□□□□ -1
VPS41-202ENST00000310301 CFLARO15519 480 aa8.8□□□□□ -1
VPS41-202ENST00000310301 NCF2P19878 526 aaPredicted RBP8.8□□□□□ -1
VPS41-202ENST00000310301 ART3Q13508 389 aa8.8□□□□□ -1
VPS41-202ENST00000310301 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
VPS41-202ENST00000310301 CC2D1AQ6P1N0 951 aaPredicted RBP8.8□□□□□ -1
VPS41-202ENST00000310301 CMTR1Q8N1G2 835 aaKnown RBP8.8□□□□□ -1
VPS41-202ENST00000310301 METTL13Q8N6R0 699 aa8.8□□□□□ -1
VPS41-202ENST00000310301 POMGNT1Q8WZA1 660 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TRAIPQ9BWF2 469 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TEKT3Q9BXF9 490 aa8.8□□□□□ -1
VPS41-202ENST00000310301 ST7Q9NRC1 585 aa8.8□□□□□ -1
VPS41-202ENST00000310301 HP1BP3Q5SSJ5 553 aaPredicted RBP8.8□□□□□ -1
VPS41-202ENST00000310301 MIS18BP1Q6P0N0 1132 aa8.8□□□□□ -1
VPS41-202ENST00000310301 RAPH1Q70E73 1250 aa8.8□□□□□ -1
VPS41-202ENST00000310301 HIPK4Q8NE63 616 aa8.8□□□□□ -1
VPS41-202ENST00000310301 MAML1Q92585 1016 aa8.8□□□□□ -1
VPS41-202ENST00000310301 THOC1Q96FV9 657 aaKnown RBP8.8□□□□□ -1
VPS41-202ENST00000310301 ABCB11O95342 1321 aa8.8□□□□□ -1
VPS41-202ENST00000310301 SIGLEC1Q9BZZ2 1709 aa8.8□□□□□ -1
VPS41-202ENST00000310301 DNAJC6O75061 913 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TOM1L1O75674 476 aa8.8□□□□□ -1
VPS41-202ENST00000310301 PRPF6O94906 941 aaKnown RBP8.8□□□□□ -1
VPS41-202ENST00000310301 TMEM259Q4ZIN3 620 aa8.8□□□□□ -1
VPS41-202ENST00000310301 DGKHQ86XP1 1220 aa8.8□□□□□ -1
VPS41-202ENST00000310301 TRIM50Q86XT4 487 aa8.8□□□□□ -1
VPS41-202ENST00000310301 NEK9Q8TD19 979 aa8.8□□□□□ -1
VPS41-202ENST00000310301 SYMPKQ92797 1274 aaKnown RBP8.8□□□□□ -1
VPS41-202ENST00000310301 TEX13BQ9BXU2 312 aa8.8□□□□□ -1
VPS41-202ENST00000310301 ZMYND12Q9H0C1 365 aa8.8□□□□□ -1
VPS41-202ENST00000310301 RPAP3Q9H6T3 665 aaPredicted RBP8.8□□□□□ -1
VPS41-202ENST00000310301 NFU1Q9UMS0 254 aa8.8□□□□□ -1
VPS41-202ENST00000310301 KDM3AQ9Y4C1 1321 aa8.8□□□□□ -1
VPS41-202ENST00000310301 DCTN3O75935 186 aa8.79□□□□□ -1
VPS41-202ENST00000310301 ECEL1O95672 775 aa8.79□□□□□ -1
VPS41-202ENST00000310301 LONP1P36776 959 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 GGCXP38435 758 aa8.79□□□□□ -1
VPS41-202ENST00000310301 EIF3BP55884 814 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 CDC42EP5Q6NZY7 148 aa8.79□□□□□ -1
VPS41-202ENST00000310301 NSUN6Q8TEA1 469 aaKnown RBP8.79□□□□□ -1
VPS41-202ENST00000310301 ZDHHC15Q96MV8 337 aa8.79□□□□□ -1
VPS41-202ENST00000310301 SERPINI1Q99574 410 aa8.79□□□□□ -1
VPS41-202ENST00000310301 PCDHA5Q9Y5H7 936 aa8.79□□□□□ -1
VPS41-202ENST00000310301 SMCO2A6NFE2 343 aa8.79□□□□□ -1
VPS41-202ENST00000310301 RASSF10A6NK89 507 aa8.79□□□□□ -1
VPS41-202ENST00000310301 MT-ND3P03897 115 aa8.79□□□□□ -1
VPS41-202ENST00000310301 MMEP08473 750 aa8.79□□□□□ -1
VPS41-202ENST00000310301 CYP2B6P20813 491 aa8.79□□□□□ -1
VPS41-202ENST00000310301 DEUP1Q05D60 604 aa8.79□□□□□ -1
VPS41-202ENST00000310301 MYO1EQ12965 1108 aa8.79□□□□□ -1
VPS41-202ENST00000310301 POLA2Q14181 598 aa8.79□□□□□ -1
VPS41-202ENST00000310301 C6orf118Q5T5N4 469 aa8.79□□□□□ -1
VPS41-202ENST00000310301 TPH2Q8IWU9 490 aa8.79□□□□□ -1
VPS41-202ENST00000310301 LCORLQ8N3X6 602 aa8.79□□□□□ -1
VPS41-202ENST00000310301 EEF2KMTQ96G04 330 aa8.79□□□□□ -1
VPS41-202ENST00000310301 CAPNS2Q96L46 248 aa8.79□□□□□ -1
VPS41-202ENST00000310301 FGFR1OP2Q9NVK5 253 aa8.79□□□□□ -1
VPS41-202ENST00000310301 CAPN11Q9UMQ6 739 aa8.79□□□□□ -1
VPS41-202ENST00000310301 IRX1P78414 480 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 KMT5BQ4FZB7 885 aa8.79□□□□□ -1
VPS41-202ENST00000310301 BEND6Q5SZJ8 279 aaPredicted RBP8.79□□□□□ -1
VPS41-202ENST00000310301 SLFN12Q8IYM2 578 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms