RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 GBP3Q9H0R5 595 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 LZTFL1Q9NQ48 299 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 RBPJLQ9UBG7 517 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 PLAGL2Q9UPG8 496 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 A0A0U1RQJ8 604 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 SOWAHBA6NEL2 793 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 K7ENM7 598 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 ALCAMQ13740 583 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 GPAT2Q6NUI2 795 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 ABHD15Q6UXT9 468 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 GOLGA5Q8TBA6 731 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 ATRIPQ8WXE1 791 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 TELO2Q9Y4R8 837 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 CTIFO43310 598 aaKnown RBP23.35■■□□□ 1.33
ATG4D-201ENST00000309469 ZNF862O60290 1169 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 XRCC5P13010 732 aaKnown RBP23.35■■□□□ 1.33
ATG4D-201ENST00000309469 BAP1Q92560 729 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 AGPAT3Q9NRZ7 376 aa23.35■■□□□ 1.33
ATG4D-201ENST00000309469 STBD1O95210 358 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 AFPP02771 609 aaKnown RBP23.34■■□□□ 1.33
ATG4D-201ENST00000309469 EDNRBP24530 442 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 PSMC2P35998 433 aaKnown RBP23.34■■□□□ 1.33
ATG4D-201ENST00000309469 GJA5P36382 358 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 SP4Q02446 784 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 SEPT14Q6ZU15 432 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 CCDC170Q8IYT3 715 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 FAM133AQ8N9E0 248 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 SLC10A4Q96EP9 437 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 LSM14BQ9BX40 385 aaKnown RBP23.34■■□□□ 1.33
ATG4D-201ENST00000309469 NHEJ1Q9H9Q4 299 aaPredicted RBP23.34■■□□□ 1.33
ATG4D-201ENST00000309469 TXNRD2Q9NNW7 524 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 DMAC2Q9NW81 257 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 REXO2Q9Y3B8 237 aaKnown RBP23.34■■□□□ 1.33
ATG4D-201ENST00000309469 SCN4AP35499 1836 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 LCTP09848 1927 aa23.34■■□□□ 1.33
ATG4D-201ENST00000309469 FANCGO15287 622 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 SORBS3O60504 671 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 COPB2P35606 906 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 CYLC1P35663 651 aaPredicted RBP23.33■■□□□ 1.33
ATG4D-201ENST00000309469 MIS18BP1Q6P0N0 1132 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 RRAGAQ7L523 313 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 CACNA2D4Q7Z3S7 1137 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 SYCP3Q8IZU3 236 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 TSC1Q92574 1164 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 BORCS6Q96GS4 357 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 CRACR2AQ9BSW2 395 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 MKNK1Q9BUB5 465 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 GPRC5CQ9NQ84 441 aa23.33■■□□□ 1.33
ATG4D-201ENST00000309469 NOL4O94818 638 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 SNAPC2Q13487 334 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 FAM102BQ5T8I3 360 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 CCDC60Q8IWA6 550 aaPredicted RBP23.33■■□□□ 1.32
ATG4D-201ENST00000309469 CEP170P1Q96L14 293 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 WDR24Q96S15 920 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 R3HDMLQ9H3Y0 253 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 ST6GALNAC4Q9H4F1 302 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 TMEM206Q9H813 350 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 L2HGDHQ9H9P8 463 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 CEP72Q9P209 647 aa23.33■■□□□ 1.32
ATG4D-201ENST00000309469 LRRC53A6NM62 1247 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 SUPT20HL2P0C7V6 817 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 CASQ1P31415 396 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 Q3C1V9 767 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 ARHGAP29Q52LW3 1261 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 PDXDC1Q6P996 788 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.32■■□□□ 1.321e-7■■■■■ 46
ATG4D-201ENST00000309469 CYFIP1Q7L576 1253 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 FAM186BQ8IYM0 893 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 ACCSQ96QU6 501 aa23.32■■□□□ 1.32
ATG4D-201ENST00000309469 KIF5CO60282 957 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 ARHGAP25P42331 645 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 KRT83P78385 493 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 RBM10P98175 930 aaKnown RBP23.31■■□□□ 1.32
ATG4D-201ENST00000309469 DCAF17Q5H9S7 520 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-201ENST00000309469 HAUS6Q7Z4H7 955 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 SLC9A9Q8IVB4 645 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 SLC35C1Q96A29 364 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 IRX2Q9BZI1 471 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-201ENST00000309469 UNCXA6NJT0 531 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 EIF3CLB5ME19 914 aaKnown RBP23.31■■□□□ 1.32
ATG4D-201ENST00000309469 ATG7O95352 703 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 POTEJP0CG39 1038 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 PEX3P56589 373 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 GTF2BQ00403 316 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 MYBPC2Q14324 1141 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 MAP1SQ66K74 1059 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-201ENST00000309469 SLC17A8Q8NDX2 589 aa23.31■■□□□ 1.32
ATG4D-201ENST00000309469 EIF3CQ99613 913 aaKnown RBP23.31■■□□□ 1.32
ATG4D-201ENST00000309469 CYP2J2P51589 502 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 NCKAP1LP55160 1127 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 PRKCEQ02156 737 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 TCERG1LQ5VWI1 586 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 NUCKS1Q9H1E3 243 aaKnown RBP23.3■■□□□ 1.32
ATG4D-201ENST00000309469 ZNF408Q9H9D4 720 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 NLRC4Q9NPP4 1024 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 FRMD4BQ9Y2L6 1034 aa23.3■■□□□ 1.32
ATG4D-201ENST00000309469 POLR2FP61218 127 aaKnown RBP23.29■■□□□ 1.32
ATG4D-201ENST00000309469 CCDC42Q96M95 316 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 ARHGAP20Q9P2F6 1191 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms