RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CACNA2D4Q7Z3S7 1137 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 DCPSQ96C86 337 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 CLMNQ96JQ2 1002 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 SENP7Q9BQF6 1050 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 MOV10L1Q9BXT6 1211 aaKnown RBP7.19□□□□□ -1.26
USP47-201ENST00000305481 PDCL3Q9H2J4 239 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 R3HDMLQ9H3Y0 253 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 GPRC5CQ9NQ84 441 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 KIAA1217Q5T5P2 1943 aa7.19□□□□□ -1.26
USP47-201ENST00000305481 UBE4BO95155 1302 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 CTAGE9A4FU28 777 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 TISP43B9A030 160 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 IRF6O14896 467 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 ZNF862O60290 1169 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 USO1O60763 962 aaKnown RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 SFNP31947 248 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 SP2Q02086 613 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 PPP2R3AQ06190 1150 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 MAPK8IP2Q13387 824 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 DCAF17Q5H9S7 520 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 SULF1Q8IWU6 871 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 SYN2Q92777 582 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 JAKMIP2Q96AA8 810 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 SIX2Q9NPC8 291 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 MAFGO15525 162 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 EPB41P11171 864 aaKnown RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 PLS3P13797 630 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 AMPD2Q01433 879 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 CNTN2Q02246 1040 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 C9orf131Q5VYM1 1079 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 ZNF746Q6NUN9 644 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 FBXO38Q6PIJ6 1188 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 LBX2Q6XYB7 198 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 KIAA1328Q86T90 577 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 GBP3Q9H0R5 595 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 METTL14Q9HCE5 456 aaKnown RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 CDC23Q9UJX2 597 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 AJAP1Q9UKB5 411 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 PCDHA13Q9Y5I0 950 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 PCDHA10Q9Y5I2 948 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 DOCK5Q9H7D0 1870 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 EFCAB8A8MWE9 144 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 SPATA31C2B4DYI2 1134 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 PSMC2P35998 433 aaKnown RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 CYP2J2P51589 502 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 VAV2P52735 878 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 GFPT1Q06210 699 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 KLHDC7AQ5VTJ3 777 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 RSRC2Q7L4I2 434 aaKnown RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 MTERF4Q7Z6M4 381 aaKnown RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 FAM186BQ8IYM0 893 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 MAP7D2Q96T17 732 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 NAPGQ99747 312 aaPredicted RBP7.18□□□□□ -1.26
USP47-201ENST00000305481 EPC1Q9H2F5 836 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 ELP3Q9H9T3 547 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 PLCB1Q9NQ66 1216 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
USP47-201ENST00000305481 WDR81Q562E7 1941 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 A0A0G2JMZ2 1700 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 K7ENM7 598 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 ENC1O14682 589 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 PPP1R12BO60237 982 aaPredicted RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 SORBS3O60504 671 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 UCHL3P15374 230 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 EXOC3L4Q17RC7 722 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 XKR9Q5GH70 373 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 SFMBT2Q5VUG0 894 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 IRF2BP2Q7Z5L9 587 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 SLC9A9Q8IVB4 645 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 MNS1Q8NEH6 495 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 RDM1Q8NG50 284 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 IFIH1Q9BYX4 1025 aaKnown RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 ANKEF1Q9NU02 776 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 LARSQ9P2J5 1176 aaKnown RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 HDAC6Q9UBN7 1215 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 GABBR1Q9UBS5 961 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 SALL4Q9UJQ4 1053 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 CSADQ9Y600 493 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 FHOD1Q9Y613 1164 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 NFASCO94856 1347 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 A0A0G2JLL6 359 aaPredicted RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 SSU72P8A0A1W2PR75 194 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 RBAK-RBAKDNI3L0D1 243 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 H2AFXP16104 143 aaPredicted RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 SOX10P56693 466 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 GTF2BQ00403 316 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 SPA17Q15506 151 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 TCERG1LQ5VWI1 586 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 SWSAP1Q6NVH7 229 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 GJB7Q6PEY0 223 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 STXBP4Q6ZWJ1 553 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 HS2ST1Q7LGA3 356 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 PRRT2Q7Z6L0 340 aaPredicted RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 ZNF526Q8TF50 670 aaPredicted RBP7.17□□□□□ -1.26
USP47-201ENST00000305481 OTUD5Q96G74 571 aa7.17□□□□□ -1.26
USP47-201ENST00000305481 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms