RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 HAUS5O94927 633 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PPARDQ03181 441 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TRIM67Q6ZTA4 783 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF589Q86UQ0 364 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 CEP70Q8NHQ1 597 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PDLIM2Q96JY6 352 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 MAGEB5Q9BZ81 275 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 IQGAP1P46940 1657 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 A0A0G2JND7 137 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 H3BRJ5 948 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TCP10Q12799 353 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PTPROQ16827 1216 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TRIM59Q8IWR1 403 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SMYD4Q8IYR2 804 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 ATP11CQ8NB49 1132 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 DCAF4Q8WV16 495 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 CAPN11Q9UMQ6 739 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TCHHQ07283 1943 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 PIK3R2O00459 728 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 AP1B1Q10567 949 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TBCCQ15814 346 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TBC1D1Q86TI0 1168 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 GPIHBP1Q8IV16 184 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SIX6OS1Q8N1H7 587 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 GIMAP8Q8ND71 665 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 EML4Q9HC35 981 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SYF2O95926 243 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 MAGOHP61326 146 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SUCLA2Q9P2R7 463 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SMG5Q9UPR3 1016 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 HSPA9P38646 679 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 BCAMP50895 628 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 COPS2P61201 443 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TMTC4Q5T4D3 741 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 POTEAQ6S8J7 498 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 CMTR1Q8N1G2 835 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 UHMK1Q8TAS1 419 aaKnown RBP8.17□□□□□ -1.1
SF3B3-201ENST00000302516 TRPV6Q9H1D0 765 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SEL1LQ9UBV2 794 aa8.17□□□□□ -1.1
SF3B3-201ENST00000302516 SLC7A5Q01650 507 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 DAB2IPQ5VWQ8 1189 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ENOSF1Q7L5Y1 443 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 DHX40Q8IX18 779 aaKnown RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 PI4K2BQ8TCG2 481 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 CALN1Q9BXU9 219 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 INTUQ9ULD6 942 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 AP3B1O00203 1094 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 IL1RL1Q01638 556 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 COG1Q8WTW3 980 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 BRIP1Q9BX63 1249 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 EDEM3Q9BZQ6 932 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 TRIM45Q9H8W5 580 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 STK32BQ9NY57 414 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 KRT7P08729 469 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ALAS1P13196 640 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ATP6V1E1P36543 226 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 KIF19Q2TAC6 998 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ANKRD13CQ8N6S4 541 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 SMCR8Q8TEV9 937 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 FOXP3Q9BZS1 431 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 SAYSD1Q9NPB0 183 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 OSBPL1AQ9BXW6 950 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 PSD3Q9NYI0 1048 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 GPC5P78333 572 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 YWHAHQ04917 246 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 PDCLQ13371 301 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 TRMT10CQ7L0Y3 403 aaKnown RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 TRIM62Q9BVG3 475 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ITIH6Q6UXX5 1313 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 GOLGA8TH3BQL2 631 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 GOLGA8HP0CJ92 632 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 AGGF1Q8N302 714 aaeCLIP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ELAC2Q9BQ52 826 aaKnown RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 NBPF3Q9H094 633 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ASNSD1Q9NWL6 643 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 CD2BP2O95400 341 aaKnown RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 AGTP01019 485 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 FAF2Q96CS3 445 aa8.16□□□□□ -1.1
SF3B3-201ENST00000302516 MOV10L1Q9BXT6 1211 aaKnown RBP8.16□□□□□ -1.1
SF3B3-201ENST00000302516 KCNA6P17658 529 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 FLOT2Q14254 428 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 NDUFAF2Q8N183 169 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 DYDC2Q96IM9 177 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 ASPSCR1Q9BZE9 553 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 SLC16A3O15427 465 aaKnown RBP8.15□□□□□ -1.1
SF3B3-201ENST00000302516 KRT8P05787 483 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 NLRP11P59045 1033 aaKnown RBP8.15□□□□□ -1.1
SF3B3-201ENST00000302516 CCNA1P78396 465 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 TRADDQ15628 312 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 E2F4Q16254 413 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 SYDE2Q5VT97 1194 aa8.15□□□□□ -1.1
SF3B3-201ENST00000302516 CPSF3Q9UKF6 684 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms