RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.35■■□□□ 1.178e-8■■□□□ 14.1
LTBP3-201ENST00000301873 KAZALD1Q96I82 304 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 WRNIP1Q96S55 665 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 PHF20Q9BVI0 1012 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 GPC4O75487 556 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 ADRA2BP18089 450 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 QARSP47897 775 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 SNRNP48Q6IEG0 339 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 VCXQ9H320 206 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 ZWILCHQ9H900 591 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 PRPSAP2O60256 369 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 ATP1A1P05023 1023 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 ARL4AP40617 200 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 ECE1P42892 770 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 CCZ1BP86790 482 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 CCZ1P86791 482 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 NFX1Q12986 1120 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 CUL1Q13616 776 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 TMEM270Q6UE05 265 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 EXOC8Q8IYI6 725 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 CCDC68Q9H2F9 335 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 RPF1Q9H9Y2 349 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 CPP00450 1065 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 C4orf50Q6ZRC1 276 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 RAPH1Q70E73 1250 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 SAAL1Q96ER3 474 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 MTMR4Q9NYA4 1195 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
LTBP3-201ENST00000301873 EIF3CLB5ME19 914 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 PPP6R3Q5H9R7 873 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 EIF3CQ99613 913 aaKnown RBP22.34■■□□□ 1.17
LTBP3-201ENST00000301873 GGCXP38435 758 aa22.33■■□□□ 1.17
LTBP3-201ENST00000301873 GPC5P78333 572 aa22.33■■□□□ 1.17
LTBP3-201ENST00000301873 SLFN12LQ6IEE8 588 aa22.33■■□□□ 1.17
LTBP3-201ENST00000301873 PRPF38AQ8NAV1 312 aaKnown RBP22.33■■□□□ 1.17
LTBP3-201ENST00000301873 CFAP57Q96MR6 1250 aa22.33■■□□□ 1.17
LTBP3-201ENST00000301873 FTLP02792 175 aaPredicted RBP22.33■■□□□ 1.17
LTBP3-201ENST00000301873 RPSAP08865 295 aaKnown RBP22.33■■□□□ 1.17
LTBP3-201ENST00000301873 ZNF667Q5HYK9 610 aa22.33■■□□□ 1.17
LTBP3-201ENST00000301873 THOC1Q96FV9 657 aaKnown RBP22.33■■□□□ 1.17
LTBP3-201ENST00000301873 TBC1D22BQ9NU19 505 aa22.33■■□□□ 1.17
LTBP3-201ENST00000301873 MED7O43513 233 aa22.33■■□□□ 1.16
LTBP3-201ENST00000301873 NAALADL2Q58DX5 795 aa22.33■■□□□ 1.16
LTBP3-201ENST00000301873 ZNF772Q68DY9 489 aaPredicted RBP22.33■■□□□ 1.16
LTBP3-201ENST00000301873 LXNQ9BS40 222 aa22.33■■□□□ 1.16
LTBP3-201ENST00000301873 AGPAT5Q9NUQ2 364 aa22.33■■□□□ 1.16
LTBP3-201ENST00000301873 DAGLAQ9Y4D2 1042 aa22.33■■□□□ 1.16
LTBP3-201ENST00000301873 ADGRB3O60242 1522 aa22.33■■□□□ 1.16
LTBP3-201ENST00000301873 UBE2Q2LH0YL09 131 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 P4HBP07237 508 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 KCNB1Q14721 858 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 PYROXD1Q8WU10 500 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 A0A087WUV0 522 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 A0A1W2PQC6 194 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 CAMTA2O94983 1202 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 RNF25Q96BH1 459 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 EIF2AK1Q9BQI3 630 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 GABBR1Q9UBS5 961 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 TUBE1Q9UJT0 475 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 AFF2P51816 1311 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 MIF4GDA9UHW6 222 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 NMT1P30419 496 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 EIF3BP55884 814 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 IRX4P78413 519 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 SH2D4BQ5SQS7 431 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 SWSAP1Q6NVH7 229 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 IFT122Q9HBG6 1241 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 TTC7AQ9ULT0 858 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 CPS1P31327 1500 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 SART1O43290 800 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 MAPK6Q16659 721 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 PCGF5Q86SE9 256 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 TBC1D16Q8TBP0 767 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 HAUS2Q9NVX0 235 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 LIMA1Q9UHB6 759 aaKnown RBP22.32■■□□□ 1.16
LTBP3-201ENST00000301873 CAPN11Q9UMQ6 739 aa22.32■■□□□ 1.16
LTBP3-201ENST00000301873 HMGB1P1B2RPK0 211 aaPredicted RBP22.31■■□□□ 1.16
LTBP3-201ENST00000301873 VAMP7P51809 220 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 ASPHQ12797 758 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 ADSSL1Q8N142 457 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 ELAC2Q9BQ52 826 aaKnown RBP22.31■■□□□ 1.16
LTBP3-201ENST00000301873 AP5M1Q9H0R1 490 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 A0A1B0GTH6 734 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 OSBPP22059 807 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 USP11P51784 963 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 JAK3P52333 1124 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 GLE1Q53GS7 698 aaKnown RBP22.31■■□□□ 1.16
LTBP3-201ENST00000301873 TMEM35BQ8NCS4 154 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 OATP04181 439 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 RC3H1Q5TC82 1133 aaKnown RBP22.31■■□□□ 1.16
LTBP3-201ENST00000301873 PPP1R18Q6NYC8 613 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 NSUN6Q8TEA1 469 aaKnown RBP22.31■■□□□ 1.16
LTBP3-201ENST00000301873 TMEM60Q9H2L4 133 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 GINM1Q9NU53 330 aa22.31■■□□□ 1.16
LTBP3-201ENST00000301873 FNDC3AQ9Y2H6 1198 aaKnown RBP22.31■■□□□ 1.16
LTBP3-201ENST00000301873 PODXLO00592 558 aa22.3■■□□□ 1.16
LTBP3-201ENST00000301873 PSMA2P25787 234 aa22.3■■□□□ 1.16
LTBP3-201ENST00000301873 SPATA4Q8NEY3 305 aa22.3■■□□□ 1.16
LTBP3-201ENST00000301873 MRFAP1Q9Y605 127 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms