RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SHOX2O60902 331 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-204ENST00000300862 CPP00450 1065 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 TRIM49P0CI25 452 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 TRIM49CP0CI26 452 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 ARP10275 920 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 BMT2Q1RMZ1 405 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 TTMPQ5BVD1 217 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 CC2D2BQ6DHV5 1058 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 FAM186BQ8IYM0 893 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 U2AF1L4Q8WU68 220 aaKnown RBP14.08□□□□□ -0.16
HIF3A-204ENST00000300862 CCDC43Q96MW1 224 aaKnown RBP14.08□□□□□ -0.16
HIF3A-204ENST00000300862 SLX4Q8IY92 1834 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 GAS7O60861 476 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 HSF2BPO75031 334 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 PSMD10O75832 226 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 KIF4AO95239 1232 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 CYP3A4P08684 503 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 MIGA2Q7L4E1 593 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 TRMT1LQ7Z2T5 733 aaKnown RBP14.07□□□□□ -0.16
HIF3A-204ENST00000300862 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 USP38Q8NB14 1042 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 BANK1Q8NDB2 785 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 RUFY1Q96T51 708 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 METTL14Q9HCE5 456 aaKnown RBP14.07□□□□□ -0.16
HIF3A-204ENST00000300862 GDF3Q9NR23 364 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 RNF14Q9UBS8 474 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
HIF3A-204ENST00000300862 PPARDQ03181 441 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 CBWD6Q4V339 395 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
HIF3A-204ENST00000300862 CBWD3Q5JTY5 395 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 CBWD5Q5RIA9 395 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 MCTP2Q6DN12 878 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 LRRC57Q8N9N7 239 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 CAVIN3Q969G5 261 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 BORCS6Q96GS4 357 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 GLIS2Q9BZE0 524 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-204ENST00000300862 OLFML3Q9NRN5 406 aa14.07□□□□□ -0.16
HIF3A-204ENST00000300862 GCOM1H8Y6P7 765 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 PIK3CDO00329 1044 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 PPIP5K2O43314 1243 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 ENTPD3O75355 529 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 FLOT1O75955 427 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 POLR2MP0CAP2 368 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 JAM2P57087 298 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 TADA2BQ86TJ2 420 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 DDX42Q86XP3 938 aaKnown RBP eCLIP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 TPCN2Q8NHX9 752 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 PARVGQ9HBI0 331 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 BZW2Q9Y6E2 419 aaKnown RBP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 UTRNP46939 3433 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 SLC16A3O15427 465 aaKnown RBP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 EVI5O60447 810 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 RAD17O75943 681 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 PSMC2P35998 433 aaKnown RBP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 FKBP1AP62942 108 aaKnown RBP14.06□□□□□ -0.16
HIF3A-204ENST00000300862 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 FAM178BQ8IXR5 827 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 METTL13Q8N6R0 699 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 RUBCNQ92622 972 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 FIZ1Q96SL8 496 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 SH3GL2Q99962 352 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 SH2D3AQ9BRG2 576 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 UNC45AQ9H3U1 944 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 YY1AP1Q9H869 796 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 OSGEPQ9NPF4 335 aa14.06□□□□□ -0.16
HIF3A-204ENST00000300862 ATRNL1Q5VV63 1379 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 SHTN1A0MZ66 631 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 H2AFZP0C0S5 128 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ABCB4P21439 1286 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 GUCY2CP25092 1073 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 PRKCIP41743 596 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 IRAK1P51617 712 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 PAK2Q13177 524 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 H2AFVQ71UI9 128 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 LNX1Q8TBB1 728 aaPredicted RBP14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ZNF577Q9BSK1 485 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
HIF3A-204ENST00000300862 TISP43B9A030 160 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 C21orf2O43822 256 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 LRRN2O75325 713 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ITGA4P13612 1032 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 GAP43P17677 238 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 TNFRSF8P28908 595 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ATP1A2P50993 1020 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 PRELPP51888 382 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 GALCP54803 685 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 HLTFQ14527 1009 aaKnown RBP eCLIP14.05□□□□□ -0.16
HIF3A-204ENST00000300862 DRAP1Q14919 205 aaPredicted RBP14.05□□□□□ -0.16
HIF3A-204ENST00000300862 TBC1D10BQ4KMP7 808 aaPredicted RBP14.05□□□□□ -0.16
HIF3A-204ENST00000300862 CEP55Q53EZ4 464 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 ZNF720Q7Z2F6 126 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 PEX26Q7Z412 305 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 DAAM2Q86T65 1068 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 SLC5A5Q92911 643 aa14.05□□□□□ -0.16
HIF3A-204ENST00000300862 DDX47Q9H0S4 455 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms