RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PCDHB6Q9Y5E3 794 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 ANO9A1A5B4 782 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 LPXNO60711 386 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 GCFC2P16383 781 aaKnown RBP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 GFPT1Q06210 699 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 ADCK1Q86TW2 530 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 ZNF473Q8WTR7 871 aaKnown RBP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 ADNPQ9H2P0 1102 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 PCDHA1Q9Y5I3 950 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 SYNGAP1Q96PV0 1343 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 ANP32DO95626 131 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 KCNA1Q09470 495 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 DRP2Q13474 957 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 MED21Q13503 144 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 RSRC2Q7L4I2 434 aaKnown RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 DDX47Q9H0S4 455 aaKnown RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 TJP3O95049 919 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 MYL1P05976 194 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 UBXN2AP68543 259 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 TRAPPC3LQ5T215 181 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 COG1Q8WTW3 980 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 PRMT1Q99873 361 aaKnown RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 NXF1Q9UBU9 619 aaKnown RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 ADGRL2O95490 1459 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 H0Y626 953 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 TRIM16O95361 564 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 IGBP1P78318 339 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 SF3B3Q15393 1217 aaKnown RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 KLHL38Q2WGJ6 581 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 LRRC8EQ6NSJ5 796 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 PPP1R2P3Q6NXS1 205 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 KRT26Q7Z3Y9 468 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 ZNF589Q86UQ0 364 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 IP6K1Q92551 441 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 SEPT9Q9UHD8 586 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 SRPRBQ9Y5M8 271 aaKnown RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 PYGLP06737 847 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 CAPN1P07384 714 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 GRK2P25098 689 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 NSUN2Q08J23 767 aaKnown RBP eCLIP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 CCNYL1Q8N7R7 359 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 SNX25Q9H3E2 840 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-201ENST00000299333 NCKAP5LQ9HCH0 1330 aa15.86■□□□□ 0.13
SCN3B-201ENST00000299333 PLCG1P19174 1290 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 MXI1P50539 228 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 HIC1Q14526 733 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 CDO1Q16878 200 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 MDH1BQ5I0G3 518 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 EPN3Q9H201 632 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 WDR47O94967 919 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 GCP02774 474 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 SPATA21Q7Z572 469 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 C7orf31Q8N865 590 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 VPS39Q96JC1 886 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 TRIM8Q9BZR9 551 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 KMT5AQ9NQR1 393 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 ZNF211Q13398 564 aaPredicted RBP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 LAMB3Q13751 1172 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 BZW1Q7L1Q6 419 aaKnown RBP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 TBCKQ8TEA7 893 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 FBXL5Q9UKA1 691 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 MED7O43513 233 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 ST13P50502 369 aaKnown RBP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 BCAMP50895 628 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
SCN3B-201ENST00000299333 KDSRQ06136 332 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 PPP4R4Q6NUP7 873 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 TEX9Q8N6V9 391 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 SLC13A1Q9BZW2 595 aa15.85■□□□□ 0.13
SCN3B-201ENST00000299333 A0A1B0GW55 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 TCP11X1B4DZS4 312 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 PPP1R37O75864 691 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4L2P0CJ85 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4L3P0CJ86 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4L4P0CJ87 422 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4L5P0CJ88 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4L6P0CJ89 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4L7P0CJ90 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 GYG1P46976 350 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 VSNL1P62760 191 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 TFAMQ00059 246 aaKnown RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 PI4K2BQ8TCG2 481 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 TTC25Q96NG3 672 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 RPS6KC1Q96S38 1066 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 DUX4Q9UBX2 424 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 AURKCQ9UQB9 309 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 XPAP23025 273 aaPredicted RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 TPP2P29144 1249 aaPredicted RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 HADHAP40939 763 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 CYLC2Q14093 348 aaPredicted RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 NAIF1Q69YI7 327 aaPredicted RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 PPM1NQ8N819 430 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms