RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 NUBP1P53384 320 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 TCF15Q12870 199 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 TMEM266Q2M3C6 531 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 PPP1R18Q6NYC8 613 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 HEATR3Q7Z4Q2 680 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 THNSL1Q8IYQ7 743 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 FANCBQ8NB91 859 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 ADAM2Q99965 735 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 AGO4Q9HCK5 861 aaKnown RBP11.99□□□□□ -0.49
RFC4-201ENST00000296273 TMEM161AQ9NX61 479 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 TMEM260Q9NX78 707 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
RFC4-201ENST00000296273 GINS2Q9Y248 185 aa11.99□□□□□ -0.49
RFC4-201ENST00000296273 MYO7AQ13402 2215 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 C9IYK1 514 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 FSCN2O14926 492 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 PER2O15055 1255 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 HOXA2O43364 376 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 TECTAO75443 2155 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 HOXB8P17481 243 aaPredicted RBP11.98□□□□□ -0.49
RFC4-201ENST00000296273 RXRAP19793 462 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 AP3B2Q13367 1082 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 KCNC3Q14003 757 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 PTPN21Q16825 1174 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 ZNF484Q5JVG2 852 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 SYNE3Q6ZMZ3 975 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 RUFY3Q7L099 469 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 NIPA1Q7RTP0 329 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
RFC4-201ENST00000296273 COLGALT1Q8NBJ5 622 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 ASIC4Q96FT7 647 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 SNX27Q96L92 541 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 PHOX2BQ99453 314 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 GLT8D2Q9H1C3 349 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 ATP6V0A4Q9HBG4 840 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 NGRNQ9NPE2 291 aaKnown RBP11.98□□□□□ -0.49
RFC4-201ENST00000296273 RIC8AQ9NPQ8 531 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 TYW1Q9NV66 732 aaKnown RBP11.98□□□□□ -0.49
RFC4-201ENST00000296273 RBM28Q9NW13 759 aaKnown RBP11.98□□□□□ -0.49
RFC4-201ENST00000296273 ST3GAL5Q9UNP4 418 aa11.98□□□□□ -0.49
RFC4-201ENST00000296273 NOC2LQ9Y3T9 749 aaKnown RBP11.98□□□□□ -0.49
RFC4-201ENST00000296273 MEIS1O00470 390 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 BACH1O14867 736 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 MGEA5O60502 916 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ARP10275 920 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 IBSPP21815 317 aaPredicted RBP11.97□□□□□ -0.49
RFC4-201ENST00000296273 AVPR2P30518 371 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 PPM1AP35813 382 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 CRYBB1P53674 252 aaPredicted RBP11.97□□□□□ -0.49
RFC4-201ENST00000296273 NAPAP54920 295 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ERVFC1P60507 584 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ITGB3BPQ13352 177 aaPredicted RBP11.97□□□□□ -0.49
RFC4-201ENST00000296273 FAM102BQ5T8I3 360 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 CREB3L3Q68CJ9 461 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ANKRD54Q6NXT1 300 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ABHD15Q6UXT9 468 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 KIAA0319LQ8IZA0 1049 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 CYP2W1Q8TAV3 490 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 MRPS27Q92552 414 aaKnown RBP11.97□□□□□ -0.49
RFC4-201ENST00000296273 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 ZNF302Q9NR11 478 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 NR2E1Q9Y466 385 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 PCDHGC5Q9Y5F6 944 aa11.97□□□□□ -0.49
RFC4-201ENST00000296273 hCG_1642624A0A1W2PR95 340 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 ZNF76P36508 570 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 SREBF1P36956 1147 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 TECP42680 631 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 FAM189BP81408 668 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 KRT17Q04695 432 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 WWC2Q6AWC2 1192 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 MIS18BP1Q6P0N0 1132 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 MICU3Q86XE3 530 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 VN1R2Q8NFZ6 395 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 TMEM40Q8WWA1 233 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
RFC4-201ENST00000296273 TCF25Q9BQ70 676 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 TMEM117Q9H0C3 514 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 S1PR5Q9H228 398 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 CWH43Q9H720 699 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 ENTPD7Q9NQZ7 604 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 PDRG1Q9NUG6 133 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 CEP131Q9UPN4 1083 aa11.96□□□□□ -0.49
RFC4-201ENST00000296273 FNDC1Q4ZHG4 1894 aaPredicted RBP11.96□□□□□ -0.49
RFC4-201ENST00000296273 KMT2EQ8IZD2 1858 aa11.96□□□□□ -0.5
RFC4-201ENST00000296273 TRAK2O60296 914 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 GFRA3O60609 400 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 ZSCAN20P17040 1043 aaPredicted RBP11.95□□□□□ -0.5
RFC4-201ENST00000296273 ADCY7P51828 1080 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 PLPP4Q5VZY2 271 aa11.95□□□□□ -0.5
RFC4-201ENST00000296273 FAM228AQ86W67 206 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms