RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 STK24Q9Y6E0 443 aa20.87■□□□□ 0.93
LSM12-201ENST00000293406 FGGP02679 453 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 SLURP2P0DP57 97 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 DHX9Q08211 1270 aaKnown RBP20.86■□□□□ 0.93
LSM12-201ENST00000293406 KCNA1Q09470 495 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 LNX1Q8TBB1 728 aaPredicted RBP20.86■□□□□ 0.93
LSM12-201ENST00000293406 LENG9Q96B70 501 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 RUSC1Q9BVN2 902 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 VCPKMTQ9H867 229 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 SETQ01105 290 aaPredicted RBP20.86■□□□□ 0.93
LSM12-201ENST00000293406 ACTN3Q08043 901 aaPredicted RBP20.86■□□□□ 0.93
LSM12-201ENST00000293406 DCAF4Q8WV16 495 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 CCDC17Q96LX7 622 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 OSGEPQ9NPF4 335 aa20.86■□□□□ 0.93
LSM12-201ENST00000293406 FAM86B1E9PN63 330 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 BUB1BO60566 1050 aaPredicted RBP20.85■□□□□ 0.93
LSM12-201ENST00000293406 FAM86B2P0C5J1 330 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 LMNB1P20700 586 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 KRT71Q3SY84 523 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 SLFN13Q68D06 897 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 CERS5Q8N5B7 392 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 BCAS3Q9H6U6 928 aa20.85■□□□□ 0.93
LSM12-201ENST00000293406 TTC7AQ9ULT0 858 aaPredicted RBP20.85■□□□□ 0.93
LSM12-201ENST00000293406 SPDYE3A6NKU9 549 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 EEF2P13639 858 aaKnown RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 SOX5P35711 763 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 SCNN1DP51172 638 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 MAGOHP61326 146 aaKnown RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 FAM182BQ5T319 152 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 CDC42EP5Q6NZY7 148 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 GLYCTKQ8IVS8 523 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 FAM186BQ8IYM0 893 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 SLC30A5Q8TAD4 765 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 SLC35G2Q8TBE7 412 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 RFFLQ8WZ73 363 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 MAGOHBQ96A72 148 aaKnown RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 CNOT8Q9UFF9 292 aaKnown RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 DDX20Q9UHI6 824 aaKnown RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 F8VZ95 297 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 TGFB1I1O43294 461 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 PPP1R12BO60237 982 aaPredicted RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 SERPINB2P05120 415 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 POU5F1Q01860 360 aaKnown RBP20.84■□□□□ 0.93
LSM12-201ENST00000293406 DRP2Q13474 957 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 PLCB4Q15147 1175 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 CCDC121Q6ZUS5 278 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 BORCS6Q96GS4 357 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 RAB17Q9H0T7 212 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 OLFML3Q9NRN5 406 aa20.84■□□□□ 0.93
LSM12-201ENST00000293406 NCANO14594 1321 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 SFI1A8K8P3 1242 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 TMEM253P0C7T8 217 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 PSMC2P35998 433 aaKnown RBP20.83■□□□□ 0.93
LSM12-201ENST00000293406 IFFO1Q0D2I5 559 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 CCDC13Q8IYE1 715 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 CTNNBL1Q8WYA6 563 aaPredicted RBP20.83■□□□□ 0.93
LSM12-201ENST00000293406 FMO2Q99518 471 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 TRIM51Q9BSJ1 452 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 AMNQ9BXJ7 453 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 STK33Q9BYT3 514 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 TRIM31Q9BZY9 425 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 COA1Q9GZY4 146 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
LSM12-201ENST00000293406 DCDC2CA8MYV0 355 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 MSH4O15457 936 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 EYA4O95677 639 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 PAEPP09466 180 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 GAP43P17677 238 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 SREBF1P36956 1147 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 SNAP25P60880 206 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 PRPF4BQ13523 1007 aaKnown RBP20.83■□□□□ 0.92
LSM12-201ENST00000293406 RAPGEF5Q92565 580 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 EIF2AK1Q9BQI3 630 aaKnown RBP20.83■□□□□ 0.92
LSM12-201ENST00000293406 VAV3Q9UKW4 847 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 PPP1R9AQ9ULJ8 1098 aa20.83■□□□□ 0.92
LSM12-201ENST00000293406 DIS3Q9Y2L1 958 aaKnown RBP20.83■□□□□ 0.92
LSM12-201ENST00000293406 GREB1LQ9C091 1923 aaPredicted RBP20.82■□□□□ 0.92
LSM12-201ENST00000293406 ABCB4P21439 1286 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 PTENP60484 403 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 NFIAQ12857 509 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 DRAP1Q14919 205 aaPredicted RBP20.82■□□□□ 0.92
LSM12-201ENST00000293406 VPS72Q15906 364 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 QPCTQ16769 361 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 USH1GQ495M9 461 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 OLIG1Q8TAK6 271 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 MKL1Q969V6 931 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 POLR3CQ9BUI4 534 aaPredicted RBP20.82■□□□□ 0.92
LSM12-201ENST00000293406 ATP8A1Q9Y2Q0 1164 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 NR2E1Q9Y466 385 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 KDM4FA0A1W2PPD8 638 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 DDX3YO15523 660 aaKnown RBP20.82■□□□□ 0.92
LSM12-201ENST00000293406 FAM13AO94988 1023 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 FOSP01100 380 aaPredicted RBP20.82■□□□□ 0.92
LSM12-201ENST00000293406 SMTNP53814 917 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 ATP8B4Q8TF62 1192 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 PSMD1Q99460 953 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 RGL1Q9NZL6 768 aa20.82■□□□□ 0.92
LSM12-201ENST00000293406 DNAJC12Q9UKB3 198 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms