RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 TRPV2Q9Y5S1 764 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 CDY2AQ9Y6F7 541 aa30.03■■■□□ 2.4
SSU72-201ENST00000291386 LOXHD1Q8IVV2 1947 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 YEATS4O95619 227 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 ACRP10323 421 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 CDC25AP30304 524 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 CLCN3P51790 818 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 ZNF365Q70YC5 407 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 DEFB128Q7Z7B8 93 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 PIGOQ8TEQ8 1089 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 SLC7A3Q8WY07 619 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 CELF4Q9BZC1 486 aaKnown RBP30.02■■■□□ 2.4
SSU72-201ENST00000291386 SUGCTQ9HAC7 445 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 SQORQ9Y6N5 450 aa30.02■■■□□ 2.4
SSU72-201ENST00000291386 M0QZ92 97 aa30.01■■■□□ 2.39
SSU72-201ENST00000291386 GAS2O43903 313 aaKnown RBP30.01■■■□□ 2.39
SSU72-201ENST00000291386 FGBP02675 491 aa30.01■■■□□ 2.39
SSU72-201ENST00000291386 ANP32AP39687 249 aaKnown RBP30.01■■■□□ 2.39
SSU72-201ENST00000291386 GRIN1Q05586 938 aa30.01■■■□□ 2.39
SSU72-201ENST00000291386 MKRN4PQ13434 485 aaPredicted RBP30.01■■■□□ 2.39
SSU72-201ENST00000291386 LRRC71Q8N4P6 559 aa30.01■■■□□ 2.39
SSU72-201ENST00000291386 MAP7D2Q96T17 732 aa30.01■■■□□ 2.39
SSU72-201ENST00000291386 KIAA1024Q9UPX6 916 aa30.01■■■□□ 2.39
SSU72-201ENST00000291386 DGAT1O75907 488 aa30■■■□□ 2.39
SSU72-201ENST00000291386 MARCKSP29966 332 aaPredicted RBP30■■■□□ 2.39
SSU72-201ENST00000291386 POLGP54098 1239 aaPredicted RBP30■■■□□ 2.39
SSU72-201ENST00000291386 SHHQ15465 462 aa30■■■□□ 2.39
SSU72-201ENST00000291386 C9orf50Q5SZB4 431 aa30■■■□□ 2.39
SSU72-201ENST00000291386 HERVK_113Q902F9 699 aa30■■■□□ 2.39
SSU72-201ENST00000291386 TFIP11Q9UBB9 837 aaKnown RBP30■■■□□ 2.39
SSU72-201ENST00000291386 PPP6R2O75170 966 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 DNM2P50570 870 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 NUCB2P80303 420 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 CDC42EP1Q00587 391 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 STK38Q15208 465 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 RASIP1Q5U651 963 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 NT5C3AQ9H0P0 336 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 DDX19AQ9NUU7 478 aaKnown RBP29.99■■■□□ 2.39
SSU72-201ENST00000291386 CFAP45Q9UL16 551 aa29.99■■■□□ 2.39
SSU72-201ENST00000291386 GPR32O75388 356 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 TMEM62Q0P6H9 643 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 DRP2Q13474 957 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 EMC2Q15006 297 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 PLEKHG4Q58EX7 1191 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 FBXO47Q5MNV8 452 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 CNKSR3Q6P9H4 555 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 KRI1Q8N9T8 703 aaKnown RBP29.98■■■□□ 2.39
SSU72-201ENST00000291386 USP38Q8NB14 1042 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 CCDC43Q96MW1 224 aaKnown RBP29.98■■■□□ 2.39
SSU72-201ENST00000291386 PNMA5Q96PV4 448 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 CSRNP2Q9H175 543 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 AKT3Q9Y243 479 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 ATP6V1DQ9Y5K8 247 aa29.98■■■□□ 2.39
SSU72-201ENST00000291386 A0A087WWV3 80 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 SPTLC2O15270 562 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 VTNP04004 478 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 ACTN1P12814 892 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 UBA7P41226 1012 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 CABP7Q86V35 215 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 MTRQ99707 1265 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 OSBPL7Q9BZF2 842 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 CCSER1Q9C0I3 900 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 XPNPEP1Q9NQW7 623 aa29.97■■■□□ 2.39
SSU72-201ENST00000291386 DAXXQ9UER7 740 aaPredicted RBP29.97■■■□□ 2.39
SSU72-201ENST00000291386 BAIAP3O94812 1187 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 CRYBB1P53674 252 aaPredicted RBP29.96■■■□□ 2.39
SSU72-201ENST00000291386 DNM1Q05193 864 aaKnown RBP29.96■■■□□ 2.39
SSU72-201ENST00000291386 GRB10Q13322 594 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 LPIN1Q14693 890 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 FAM43BQ6ZT52 329 aaPredicted RBP29.96■■■□□ 2.39
SSU72-201ENST00000291386 TCP11Q8WWU5 503 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 ADAMTS10Q9H324 1103 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 ATP6V0A4Q9HBG4 840 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 SUCLA2Q9P2R7 463 aaPredicted RBP29.96■■■□□ 2.39
SSU72-201ENST00000291386 DNM3Q9UQ16 869 aa29.96■■■□□ 2.39
SSU72-201ENST00000291386 EYA4O95677 639 aa29.95■■■□□ 2.39
SSU72-201ENST00000291386 GPC3P51654 580 aa29.95■■■□□ 2.39
SSU72-201ENST00000291386 FOXD4L6Q3SYB3 417 aaPredicted RBP29.95■■■□□ 2.39
SSU72-201ENST00000291386 TMEM119Q4V9L6 283 aa29.95■■■□□ 2.39
SSU72-201ENST00000291386 FOXD4L3Q6VB84 417 aaPredicted RBP29.95■■■□□ 2.39
SSU72-201ENST00000291386 TSHZ1Q6ZSZ6 1077 aa29.95■■■□□ 2.39
SSU72-201ENST00000291386 APBB2Q92870 758 aa29.95■■■□□ 2.39
SSU72-201ENST00000291386 MTIF3Q9H2K0 278 aaKnown RBP29.95■■■□□ 2.39
SSU72-201ENST00000291386 CDHR5Q9HBB8 845 aa29.95■■■□□ 2.39
SSU72-201ENST00000291386 GHRP10912 638 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 NLRP11P59045 1033 aaKnown RBP29.94■■■□□ 2.38
SSU72-201ENST00000291386 KIZQ2M2Z5 673 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 OTOP2Q7RTS6 562 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 DBF4BQ8NFT6 615 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 KCNG4Q8TDN1 519 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 SEPT8Q92599 483 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 CALML4Q96GE6 196 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 RNPC3Q96LT9 517 aaKnown RBP29.94■■■□□ 2.38
SSU72-201ENST00000291386 CLIC6Q96NY7 704 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 BHMT2Q9H2M3 363 aa29.94■■■□□ 2.38
SSU72-201ENST00000291386 ARHGEF35A5YM69 484 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 E9PMD0 336 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 ASAP2O43150 1006 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 TCTN1Q2MV58 587 aa29.93■■■□□ 2.38
SSU72-201ENST00000291386 LRIT3Q3SXY7 679 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms