RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 NRAPQ86VF7 1730 aa18.39■□□□□ 0.53
RTN1-201ENST00000267484 PITPNM2Q9BZ72 1349 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 EML1O00423 815 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 CHMP2AO43633 222 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 CALUO43852 315 aaPredicted RBP18.38■□□□□ 0.53
RTN1-201ENST00000267484 SHBGP04278 402 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 EEF2P13639 858 aaKnown RBP18.38■□□□□ 0.53
RTN1-201ENST00000267484 PRKCIP41743 596 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
RTN1-201ENST00000267484 ARHGEF26Q96DR7 871 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 TRIM49P0CI25 452 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 TRIM49CP0CI26 452 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 PPP2R2AP63151 447 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
RTN1-201ENST00000267484 OSBPL7Q9BZF2 842 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.38■□□□□ 0.53
RTN1-201ENST00000267484 TMOD4Q9NZQ9 345 aa18.38■□□□□ 0.53
RTN1-201ENST00000267484 CES2O00748 559 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 TRAPPC3O43617 180 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 IFFO1Q0D2I5 559 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 ARHGAP44Q17R89 818 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 C6orf89Q6UWU4 347 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 SLFN11Q7Z7L1 901 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 RDH13Q8NBN7 331 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 OLIG1Q8TAK6 271 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 LENG9Q96B70 501 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 CALR3Q96L12 384 aaKnown RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 NENFQ9UMX5 172 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 F8VZ95 297 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 DNM1LO00429 736 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 PDXKO00764 312 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 TGFB1I1O43294 461 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 ACTN3Q08043 901 aaPredicted RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 VPS36Q86VN1 386 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 ARFGAP2Q8N6H7 521 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 TBC1D22AQ8WUA7 517 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 AMFRQ9UKV5 643 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 TLDC2A0PJX2 215 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 LRRN2O75325 713 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 PDE4CQ08493 712 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 CDC42EP5Q6NZY7 148 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 CCDC121Q6ZUS5 278 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 HES6Q96HZ4 224 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 CEP89Q96ST8 783 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 VCPKMTQ9H867 229 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 TYW1Q9NV66 732 aaKnown RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 PNMA2Q9UL42 364 aa18.37■□□□□ 0.53
RTN1-201ENST00000267484 UTP11Q9Y3A2 253 aaKnown RBP18.37■□□□□ 0.53
RTN1-201ENST00000267484 CAND2O75155 1236 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 RPA1P27694 616 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 DRAP1Q14919 205 aaPredicted RBP18.36■□□□□ 0.53
RTN1-201ENST00000267484 SLFN13Q68D06 897 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 SLFN12Q8IYM2 578 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 RASGEF1CQ8N431 466 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 LOC102724159A0A0B4J2E5 919 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 GOLGA6L7A0A1B0GV03 622 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 MSH4O15457 936 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 CYP2J2P51589 502 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 PLS1Q14651 629 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 PWP2Q15269 919 aaKnown RBP18.36■□□□□ 0.53
RTN1-201ENST00000267484 CBWD6Q4V339 395 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 CBWD3Q5JTY5 395 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 CBWD5Q5RIA9 395 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 SPATS2Q86XZ4 545 aaKnown RBP18.36■□□□□ 0.53
RTN1-201ENST00000267484 CCDC26Q8TAB7 109 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 SEC16BQ96JE7 1060 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 CCDC114Q96M63 670 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 SWAP70Q9UH65 585 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 DNAJC12Q9UKB3 198 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 CCDC188H7C350 402 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 HOXA7P31268 230 aaPredicted RBP18.36■□□□□ 0.53
RTN1-201ENST00000267484 STAT1P42224 750 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 BYSLQ13895 437 aaKnown RBP18.36■□□□□ 0.53
RTN1-201ENST00000267484 LLGL1Q15334 1064 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 C1orf131Q8NDD1 294 aaKnown RBP18.36■□□□□ 0.53
RTN1-201ENST00000267484 PAGR1Q9BTK6 254 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 THAP2Q9H0W7 228 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 SNX24Q9Y343 169 aa18.36■□□□□ 0.53
RTN1-201ENST00000267484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 BHMG1C9JSJ3 638 aaPredicted RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 RGL2O15211 777 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 FAM186BQ8IYM0 893 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 LMBR1Q8WVP7 490 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 SLC40A1Q9NP59 571 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 ATXN2Q99700 1313 aaKnown RBP18.35■□□□□ 0.53
RTN1-201ENST00000267484 TMEM110-MUSTN1A8MSY1 372 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 SERPINB2P05120 415 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 PLTPP55058 493 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 UBXN2AP68543 259 aa18.35■□□□□ 0.53
RTN1-201ENST00000267484 TPH2Q8IWU9 490 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms