RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RESP18Q5W5W9 173 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 EPM2AIP1Q7L775 607 aaPredicted RBP19.27■□□□□ 0.68
COL5A3-201ENST00000264828 GIPC2Q8TF65 315 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 TRIM55Q9BYV6 548 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 FGFR1OP2Q9NVK5 253 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 PPP1R2P3Q6NXS1 205 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 MAGOHP61326 146 aaKnown RBP19.27■□□□□ 0.68
COL5A3-201ENST00000264828 NOP14P78316 857 aaKnown RBP19.27■□□□□ 0.68
COL5A3-201ENST00000264828 ABHD10Q9NUJ1 306 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 ANAPC7Q9UJX3 599 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 WDR64B1ANS9 1081 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 YY1AP1Q9H869 796 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 RPF1Q9H9Y2 349 aaKnown RBP19.27■□□□□ 0.68
COL5A3-201ENST00000264828 LRFN2Q9ULH4 789 aa19.27■□□□□ 0.68
COL5A3-201ENST00000264828 HEG1Q9ULI3 1381 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 TERF2Q15554 542 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 C16orf87Q6PH81 154 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 GTSE1Q9NYZ3 720 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 DNAJC12Q9UKB3 198 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 PNMA2Q9UL42 364 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 SUFUQ9UMX1 484 aa19.27■□□□□ 0.67
COL5A3-201ENST00000264828 TJP3O95049 919 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 PEX3P56589 373 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 LRRC63Q05C16 580 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 C1orf146Q5VVC0 180 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 TADA2BQ86TJ2 420 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 FAM167BQ9BTA0 163 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 TMEM60Q9H2L4 133 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 MYO1CO00159 1063 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 IFNAR1P17181 557 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 PIH1D3Q9NQM4 214 aaKnown RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 TTC7AQ9ULT0 858 aaPredicted RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 MAGEA9P43362 315 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 MDM2Q00987 491 aaPredicted RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 NLRP4Q96MN2 994 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 FAM8A1Q9UBU6 413 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 MID2Q9UJV3 735 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 ACTN3Q08043 901 aaPredicted RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 TAF1BQ53T94 588 aaPredicted RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 PPP4R4Q6NUP7 873 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 MIGA2Q7L4E1 593 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 SRRM1Q8IYB3 904 aaKnown RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 GOLPH3LQ9H4A5 285 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 NGRNQ9NPE2 291 aaKnown RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 PSAPP07602 524 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 SEPT2Q15019 361 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 GRAMD4Q6IC98 578 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 SZRD1Q7Z422 152 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 EPC1Q9H2F5 836 aa19.26■□□□□ 0.67
COL5A3-201ENST00000264828 WARS2Q9UGM6 360 aaKnown RBP19.26■□□□□ 0.67
COL5A3-201ENST00000264828 LMNAP02545 664 aaKnown RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 TAC1P20366 129 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 BHMT2Q9H2M3 363 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 SLC13A4Q9UKG4 626 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 ADAM21Q9UKJ8 722 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 RNF139Q8WU17 664 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 DCTN4Q9UJW0 460 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 LRRC53A6NM62 1247 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 E2F6O75461 281 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 ZNF211Q13398 564 aaPredicted RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 APOBEC2Q9Y235 224 aaKnown RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 CAPRIN1Q14444 709 aaKnown RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 RFX8Q6ZV50 586 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 KLC2Q9H0B6 622 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 AP5M1Q9H0R1 490 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 IPO5O00410 1097 aaKnown RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 HADHAP40939 763 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 ARL4CP56559 192 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 CC2D1AQ6P1N0 951 aaPredicted RBP19.25■□□□□ 0.67
COL5A3-201ENST00000264828 FRA10AC1Q70Z53 315 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 NUDCD3Q8IVD9 361 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 RHOT2Q8IXI1 618 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 RAPGEF5Q92565 580 aa19.25■□□□□ 0.67
COL5A3-201ENST00000264828 hCG_1984214I3L0E3 225 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 EIF2AK2P19525 551 aaKnown RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 SLFNL1Q499Z3 407 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 ZNF713Q8N859 430 aaPredicted RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 L3MBTL1Q9Y468 752 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 GLI2P10070 1586 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 ANXA13P27216 316 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 NFRKBQ6P4R8 1299 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 OR6B3Q8NGW1 331 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 VPS11Q9H270 941 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 ECT2Q9H8V3 914 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 ESYT3A0FGR9 886 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 PODXLO00592 558 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 CNOT8Q9UFF9 292 aaKnown RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 MRFAP1Q9Y605 127 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 ERBB3P21860 1342 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 CTIFO43310 598 aaKnown RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 GNL1P36915 607 aaPredicted RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 PMS2P54278 862 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 SERPINB13Q9UIV8 391 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 PLA2R1Q13018 1463 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 SYCE1LA8MT33 242 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 KRT37O76014 449 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms