RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TNFAIP3P21580 790 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 FNTAP49354 379 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 NFIAQ12857 509 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 DRAP1Q14919 205 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-201ENST00000263856 TMC3Q7Z5M5 1100 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 LRRC57Q8N9N7 239 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 PSMD1Q99460 953 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 RREB1Q92766 1687 aa13.46□□□□□ -0.25
CHMP3-201ENST00000263856 DDX60LQ5H9U9 1706 aaKnown RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 RPL13P26373 211 aaKnown RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 DR1Q01658 176 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 GKAP1Q5VSY0 366 aaPredicted RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 CD302Q8IX05 232 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 ERVK-5Q9HDB9 667 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 MLXIPLQ9NP71 852 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 DNAJC17Q9NVM6 304 aaKnown RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.26
CHMP3-201ENST00000263856 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.26
CHMP3-201ENST00000263856 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
CHMP3-201ENST00000263856 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-201ENST00000263856 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-201ENST00000263856 FSBPO95073 299 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 HLA-DOAP06340 250 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 ADCY1Q08828 1119 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 MTMR3Q13615 1198 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 EDRF1Q3B7T1 1238 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 OTUD6AQ7L8S5 288 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 NT5DC3Q86UY8 548 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
CHMP3-201ENST00000263856 ZFPM1Q8IX07 1006 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 SYCP3Q8IZU3 236 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 CEP89Q96ST8 783 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 THAP2Q9H0W7 228 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 CTTNBP2NLQ9P2B4 639 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 RABGAP1Q9Y3P9 1069 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 BZW2Q9Y6E2 419 aaKnown RBP13.45□□□□□ -0.26
CHMP3-201ENST00000263856 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 GOLGA6L10A0A0M3HER8 536 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 ATMINO43313 823 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-201ENST00000263856 FGFR4P22455 802 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 HOXD13P35453 343 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 EPHA7Q15375 998 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 FRMD5Q7Z6J6 570 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 SYCE1Q8N0S2 351 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 SLC35C1Q96A29 364 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 PCIF1Q9H4Z3 704 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 AZI2Q9H6S1 392 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 BAIAP2L1Q9UHR4 511 aa13.45□□□□□ -0.26
CHMP3-201ENST00000263856 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 F8VZ95 297 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 CCDC188H7C350 402 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 DNM1LO00429 736 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 CLSTN1O94985 981 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 POLD1P28340 1107 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 FAM133BQ5BKY9 247 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 DYDC1Q8WWB3 177 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 TMEM59LQ9UK28 342 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 FAM86B1E9PN63 330 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 H0YGN5 161 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 FAM86B2P0C5J1 330 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 ATP2B4P23634 1241 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 CLK2P49760 499 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 MESDQ14696 234 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 PPP1R7Q15435 360 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 DENND2CQ68D51 928 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 PPP4R3CPQ6ZMV5 832 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 ELMO3Q96BJ8 720 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 P2RX7Q99572 595 aaKnown RBP13.44□□□□□ -0.26
CHMP3-201ENST00000263856 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 NFS1Q9Y697 457 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 ASTN1O14525 1302 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 SPATA31A5Q5VU36 1347 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 SPATA31A7Q8IWB4 1347 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
CHMP3-201ENST00000263856 CFBP00751 764 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms