RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 GBP5Q96PP8 586 aa15.33■□□□□ 0.05
SCARF1-201ENST00000263071 NACA2Q9H009 215 aa15.33■□□□□ 0.05
SCARF1-201ENST00000263071 KIAA1024Q9UPX6 916 aa15.33■□□□□ 0.05
SCARF1-201ENST00000263071 KLRC1P26715 233 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 CFAP221Q4G0U5 840 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
SCARF1-201ENST00000263071 ARL6IP4Q66PJ3 421 aaKnown RBP15.33■□□□□ 0.04
SCARF1-201ENST00000263071 ANO7Q6IWH7 933 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 C4orf32Q8N8J7 132 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 FGFBP2Q9BYJ0 223 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 SUPT3HO75486 399 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 SLC9C1Q4G0N8 1177 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 MIIPQ5JXC2 388 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 DDX47Q9H0S4 455 aaKnown RBP15.33■□□□□ 0.04
SCARF1-201ENST00000263071 OCEL1Q9H607 264 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 SH2D4AQ9H788 454 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 BMP2KQ9NSY1 1161 aaPredicted RBP15.33■□□□□ 0.04
SCARF1-201ENST00000263071 SCOCQ9UIL1 159 aa15.33■□□□□ 0.04
SCARF1-201ENST00000263071 MYH10P35580 1976 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 SRRM3A6NNA2 597 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-201ENST00000263071 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-201ENST00000263071 PDLIM1O00151 329 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 CLIC2O15247 247 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 RMDN2Q96LZ7 410 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 DMAP1Q9NPF5 467 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-201ENST00000263071 ZNF233A6NK53 670 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L15C9J2P7 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L13C9JLJ4 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L11C9JVI0 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L18D6R9N7 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L22D6RA61 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L17D6RBQ6 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L19D6RCP7 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L20D6RJB6 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 TRAPPC3O43617 180 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 BAG3O95817 575 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 BTDP43251 543 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L24Q0WX57 530 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 MYBPC2Q14324 1141 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 FAM98CQ17RN3 349 aaKnown RBP15.32■□□□□ 0.04
SCARF1-201ENST00000263071 TSNAXIP1Q2TAA8 658 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 USP17L6PQ6QN14 398 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-201ENST00000263071 KLHL29Q96CT2 875 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 ATP8A2Q9NTI2 1148 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 KBTBD4Q9NVX7 518 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 BARHL2Q9NY43 387 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
SCARF1-201ENST00000263071 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 MYZAPP0CAP1 466 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 GNA11P29992 359 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 SH2D4BQ5SQS7 431 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 WDR37Q9Y2I8 494 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 A0A1W2PQC6 194 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 CHMP2AO43633 222 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 GBP1P32455 592 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 ZNF268Q14587 947 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 USH1GQ495M9 461 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 HAUS3Q68CZ6 603 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 IKZF4Q9H2S9 585 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 ASB3Q9Y575 518 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 G3V3G9 751 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 ZFXP17010 805 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 SCNN1DP51172 638 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 TCP10Q12799 353 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 LBRQ14739 615 aaKnown RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 GJB7Q6PEY0 223 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 TRAIPQ9BWF2 469 aa15.31■□□□□ 0.04
SCARF1-201ENST00000263071 COL5A2P05997 1499 aaPredicted RBP15.31■□□□□ 0.04
SCARF1-201ENST00000263071 A0A087X0T9 212 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 ABLIM1O14639 778 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 FAM228BP0C875 321 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 SP100P23497 879 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 CACNB3P54284 484 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 KCNJ2P63252 427 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 PABPC4Q13310 644 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 NANOGNBQ7Z5D8 188 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 IFT20Q8IY31 132 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 ATP11CQ8NB49 1132 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 ALOX15P16050 662 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 TCP1P17987 556 aaKnown RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 ITGB3BPQ13352 177 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-201ENST00000263071 MAN2A1Q16706 1144 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 SAPCD2Q86UD0 394 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 MYOCDQ8IZQ8 938 aa15.3■□□□□ 0.04
SCARF1-201ENST00000263071 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms