RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 SLC5A4Q9NY91 659 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 COL4A3BPQ9Y5P4 624 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 A6NHS1 94 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 NAT1P18440 290 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 HIBADHP31937 336 aaKnown RBP15.12■□□□□ 0.01
LIMD2-201ENST00000259006 ZNF211Q13398 564 aaPredicted RBP15.12■□□□□ 0.01
LIMD2-201ENST00000259006 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 DAAM2Q86T65 1068 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
LIMD2-201ENST00000259006 SLX1AQ9BQ83 275 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 PREBQ9HCU5 417 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 NR2E1Q9Y466 385 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 ITIH3Q06033 890 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 TAF11Q15544 211 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 GLE1Q53GS7 698 aaKnown RBP15.12■□□□□ 0.01
LIMD2-201ENST00000259006 KRT79Q5XKE5 535 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 METTL13Q8N6R0 699 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 NLRP3Q96P20 1036 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
LIMD2-201ENST00000259006 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 GALNT8Q9NY28 637 aa15.12■□□□□ 0.01
LIMD2-201ENST00000259006 CHORDC1Q9UHD1 332 aaPredicted RBP15.12■□□□□ 0.01
LIMD2-201ENST00000259006 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 GNPATO15228 680 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 CTNND1O60716 968 aaKnown RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 EIF4BP23588 611 aaKnown RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 CA8P35219 290 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 SLC18A3Q16572 532 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 SDCCAG8Q86SQ7 713 aaPredicted RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 CCDC63Q8NA47 563 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 LINC00116Q8NCU8 138 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 BCAS3Q9H6U6 928 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 MLXIPLQ9NP71 852 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 SRP68Q9UHB9 627 aaKnown RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 NOC2LQ9Y3T9 749 aaKnown RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 PJA2O43164 708 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 TRIM37O94972 964 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 GRM4Q14833 912 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 Q4G0T1 1027 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 CCDC38Q502W7 563 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 PEX26Q7Z412 305 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 LRRC47Q8N1G4 583 aaKnown RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 PRCCQ92733 491 aaPredicted RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 PAGR1Q9BTK6 254 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
LIMD2-201ENST00000259006 TAF1P21675 1872 aa15.11■□□□□ 0.01
LIMD2-201ENST00000259006 USP17L5A8MUK1 530 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 NTSR2O95665 410 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 FGFR1OPO95684 399 aaKnown RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ZNF24P17028 368 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 FUT4P22083 530 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 COASYQ13057 564 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ADAM9Q13443 819 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ZNF572Q7Z3I7 529 aaPredicted RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 RNF10Q8N5U6 811 aaKnown RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 IKZF4Q9H2S9 585 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 TRPC5Q9UL62 973 aaPredicted RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 PPP2R2AP63151 447 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 FAM26FQ5R3K3 315 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 UBAP2Q5T6F2 1119 aaKnown RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ZNF571Q7Z3V5 609 aaPredicted RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 KRT25Q7Z3Z0 450 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 TMEM110Q86TL2 294 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 GUF1Q8N442 669 aaKnown RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 GLG1Q92896 1179 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ARHGEF10LQ9HCE6 1279 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 CEP72Q9P209 647 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 DUOX1Q9NRD9 1551 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 TOGARAM1Q9Y4F4 1720 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 A6NNZ2 444 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 MEIS1O00470 390 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 LCA5LO95447 670 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 SHBGP04278 402 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 TMEM266Q2M3C6 531 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 TUBB8Q3ZCM7 444 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 U2AF1L4Q8WU68 220 aaKnown RBP15.1■□□□□ 0.01
LIMD2-201ENST00000259006 AK8Q96MA6 479 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 ATP8A2Q9NTI2 1148 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 LNPEPQ9UIQ6 1025 aa15.1■□□□□ 0.01
LIMD2-201ENST00000259006 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
LIMD2-201ENST00000259006 ECHS1P30084 290 aa15.09■□□□□ 0.01
LIMD2-201ENST00000259006 ADCY1Q08828 1119 aa15.09■□□□□ 0.01
LIMD2-201ENST00000259006 KCNH2Q12809 1159 aa15.09■□□□□ 0.01
LIMD2-201ENST00000259006 GKAP1Q5VSY0 366 aaPredicted RBP15.09■□□□□ 0.01
LIMD2-201ENST00000259006 ISCUQ9H1K1 167 aa15.09■□□□□ 0.01
LIMD2-201ENST00000259006 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
LIMD2-201ENST00000259006 SSU72P8A0A1W2PR75 194 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms