RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PPP1R12BO60237 982 aaPredicted RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 TACC1O75410 805 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 SASH3O75995 380 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 FGFR1OPO95684 399 aaKnown RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 NR3C2P08235 984 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 YWHABP31946 246 aaKnown RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 CLK2P49760 499 aaKnown RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 USP11P51784 963 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 HIRAP54198 1017 aaPredicted RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 KRT83P78385 493 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 PDIA5Q14554 519 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 SPOPLQ6IQ16 392 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 CCDC50Q8IVM0 306 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 CTNNBL1Q8WYA6 563 aaPredicted RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 MRRFQ96E11 262 aaKnown RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 NLRP4Q96MN2 994 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 EHD4Q9H223 541 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 DPH5Q9H2P9 285 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 CDK5RAP2Q96SN8 1893 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 MYH15Q9Y2K3 1946 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 SCN7AQ01118 1682 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 NID2Q14112 1375 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 BCORQ6W2J9 1755 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 DOCK2Q92608 1830 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 DENND3A2RUS2 1198 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 IRF6O14896 467 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 OAS2P29728 719 aaKnown RBP9.94□□□□□ -0.82
CKAP2-201ENST00000258607 TKFCQ3LXA3 575 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 DAAM2Q86T65 1068 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 ZNF507Q8TCN5 953 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 GBP3Q9H0R5 595 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 SH2D4AQ9H788 454 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 EMSYQ7Z589 1322 aa9.94□□□□□ -0.82
CKAP2-201ENST00000258607 FOSP01100 380 aaPredicted RBP9.93□□□□□ -0.82
CKAP2-201ENST00000258607 KRT13P13646 458 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 PBX1P40424 430 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 ZNF280CQ8ND82 737 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 KRT12Q99456 494 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 TAS2R14Q9NYV8 317 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 HTTP42858 3142 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 CTIFO43310 598 aaKnown RBP9.93□□□□□ -0.82
CKAP2-201ENST00000258607 TLR2O60603 784 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 GJB6O95452 261 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 AFPP02771 609 aaKnown RBP9.93□□□□□ -0.82
CKAP2-201ENST00000258607 HOXD13P35453 343 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 NUMBP49757 651 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 ADCY1Q08828 1119 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 AP3B2Q13367 1082 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 LY6KQ17RY6 165 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 LONRF2Q1L5Z9 754 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
CKAP2-201ENST00000258607 KRT222Q8N1A0 295 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 SLC20A1Q8WUM9 679 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 CD2APQ9Y5K6 639 aa9.93□□□□□ -0.82
CKAP2-201ENST00000258607 HGSO14964 777 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 KRT19P08727 400 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 UCHL3P15374 230 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 SPIRE1Q08AE8 756 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 TMEM119Q4V9L6 283 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 SRGAP1Q7Z6B7 1085 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 THNSL1Q8IYQ7 743 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 KLHL11Q9NVR0 708 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 DNAJC12Q9UKB3 198 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 VAV3Q9UKW4 847 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 CSADQ9Y600 493 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 MRPL42Q9Y6G3 142 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 UBR3Q6ZT12 1888 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 NAV1Q8NEY1 1877 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 IGLV3-22A0A075B6J6 115 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 EVI5O60447 810 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 CCNE2O96020 404 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 MYBL2P10244 700 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 POLGP54098 1239 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 MESDQ14696 234 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 TMEM132BQ14DG7 1078 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 SCARA3Q6AZY7 606 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 HAUS6Q7Z4H7 955 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 DCPSQ96C86 337 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 MXRA8Q9BRK3 442 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 LRRC1Q9BTT6 524 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 CUEDC2Q9H467 287 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 DMGDHQ9UI17 866 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 PTPN22Q9Y2R2 807 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 PVALEFA0A1B0GWK0 134 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 NOP56O00567 594 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 CALUO43852 315 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 DRP2Q13474 957 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 VGLL4Q14135 290 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 TRIP13Q15645 432 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 ALKBH5Q6P6C2 394 aaKnown RBP9.92□□□□□ -0.82
CKAP2-201ENST00000258607 CCDC25Q86WR0 208 aa9.92□□□□□ -0.82
CKAP2-201ENST00000258607 SYT2Q8N9I0 419 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms