RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
NIP7-202ENST00000254941 GH1P01241 217 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 IGHA2P01877 340 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 CTGFP29279 349 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 RGS2P41220 211 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 ADCYAP1R1P41586 468 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 SPAG1Q07617 926 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 ODR4Q5SWX8 454 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 OLFML2BQ68BL8 750 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 IQSEC1Q6DN90 963 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 PLPPR4Q7Z2D5 763 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 ZNF720Q7Z2F6 126 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 FAM178BQ8IXR5 827 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 ZNF507Q8TCN5 953 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 NAP1L5Q96NT1 182 aaPredicted RBP10.45□□□□□ -0.74
NIP7-202ENST00000254941 CTAGE1Q96RT6 745 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 APBA2Q99767 749 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
NIP7-202ENST00000254941 KCTD10Q9H3F6 313 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
NIP7-202ENST00000254941 GCNT3O95395 438 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 MYBP10242 640 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 MAPTP10636 758 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 PLS3P13797 630 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 HOXD13P35453 343 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 SLC26A2P50443 739 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 LACTBP83111 547 aaPredicted RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 KNOP1Q1ED39 458 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 CCDC144BQ3MJ40 725 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 DUSP28Q4G0W2 176 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 TCP11X2Q5H9J9 407 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 GJC2Q5T442 439 aaPredicted RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 MAEAQ7L5Y9 396 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 MCPH1Q8NEM0 835 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 PPTC7Q8NI37 304 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 FAM167AQ96KS9 214 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 TSG101Q99816 390 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 CFHR5Q9BXR6 569 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 NRBP2Q9NSY0 501 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 FLRT1Q9NZU1 646 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 LIMA1Q9UHB6 759 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 DNAH12Q6ZR08 3092 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 A0A1B0GTH6 734 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 KCNJ18B7U540 433 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 NKRFO15226 690 aaKnown RBP eCLIP10.44□□□□□ -0.74
NIP7-202ENST00000254941 PPP1R37O75864 691 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 TPM3P06753 285 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 CYP2B6P20813 491 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 EEF1GP26641 437 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 NMT1P30419 496 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 FCGRTP55899 365 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 FKBP3Q00688 224 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 KCNJ12Q14500 433 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 KRT31Q15323 416 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 TARBP2Q15633 366 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 MTERF2Q49AM1 385 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 HS1BP3Q53T59 392 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 STXBP4Q6ZWJ1 553 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 NELFCDQ8IXH7 590 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 SPC24Q8NBT2 197 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 ANKRD20A12PQ8NF67 263 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 KIFAP3Q92845 792 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 GLG1Q92896 1179 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 TRIM44Q96DX7 344 aaPredicted RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 CEP89Q96ST8 783 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 STRA6Q9BX79 667 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 SMARCAD1Q9H4L7 1026 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 DHX33Q9H6R0 707 aaKnown RBP10.44□□□□□ -0.74
NIP7-202ENST00000254941 C17orf75Q9HAS0 396 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 INTS13Q9NVM9 706 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 PPME1Q9Y570 386 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 UBE4BO95155 1302 aa10.44□□□□□ -0.74
NIP7-202ENST00000254941 PDXKO00764 312 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 PRPF6O94906 941 aaKnown RBP10.43□□□□□ -0.74
NIP7-202ENST00000254941 FGFR1OPO95684 399 aaKnown RBP10.43□□□□□ -0.74
NIP7-202ENST00000254941 SMPD1P17405 629 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 PTGS1P23219 599 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 MAP2K2P36507 400 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 PSMC4P43686 418 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 RTP1P59025 263 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 ALCAMQ13740 583 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 NR1I3Q14994 352 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 CCL14Q16627 93 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 EDRF1Q3B7T1 1238 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 FAM102BQ5T8I3 360 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 LRRC55Q6ZSA7 311 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 FAM114A1Q8IWE2 563 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 DRC7Q8IY82 874 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
NIP7-202ENST00000254941 EEF2KMTQ96G04 330 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 NTPCRQ9BSD7 190 aaKnown RBP10.43□□□□□ -0.74
NIP7-202ENST00000254941 ST6GALNAC4Q9H4F1 302 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 ATP6V0A4Q9HBG4 840 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 GPRC5CQ9NQ84 441 aa10.43□□□□□ -0.74
NIP7-202ENST00000254941 XPNPEP1Q9NQW7 623 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms