RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TET1Q8NFU7 2136 aa20.12■□□□□ 0.81
SNRPA1-201ENST00000254193 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 GPR32O75388 356 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 AMHP03971 560 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 PTGDRQ13258 359 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 SNX21Q969T3 373 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 ZNF668Q96K58 619 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 CEP170P1Q96L14 293 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 OSMRQ99650 979 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 SLC28A3Q9HAS3 691 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 PADI3Q9ULW8 664 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 NOC2LQ9Y3T9 749 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 SQORQ9Y6N5 450 aa20.11■□□□□ 0.81
SNRPA1-201ENST00000254193 A0A087WWV3 80 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 IGKV6-21A0A0C4DH24 114 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 TLL1O43897 1013 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 MAFO75444 373 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 GJB5O95377 273 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 CA3P07451 260 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 CRYBB1P53674 252 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 NLRP11P59045 1033 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 PAK2Q13177 524 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 GRIN2CQ14957 1233 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 ADAMTS10Q9H324 1103 aa20.1■□□□□ 0.81
SNRPA1-201ENST00000254193 VPS37CA5D8V6 355 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 ENPP3O14638 875 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 RPS6KA5O75582 802 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 ARHGEF15O94989 841 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 UPP2O95045 317 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 SPATA31C1P0DKV0 1188 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 NFX1Q12986 1120 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 RILPL1Q5EBL4 403 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 XKR9Q5GH70 373 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 PPP2R2DQ66LE6 453 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 OTUD6AQ7L8S5 288 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 NEK9Q8TD19 979 aa20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 INTS4Q96HW7 963 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 CDX2Q99626 313 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 BMP2KQ9NSY1 1161 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-201ENST00000254193 LCHNA4D1U4 455 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 MED24O75448 989 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 LYPLA2O95372 231 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 PDCP20941 246 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 DNM2P50570 870 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 GPC3P51654 580 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 RTN4RL1Q86UN2 441 aaPredicted RBP20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 FERMT3Q86UX7 667 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 CATSPER3Q86XQ3 398 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 PIGOQ8TEQ8 1089 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 LINC01599Q8WXQ3 324 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 TOP1MTQ969P6 601 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 RAD9AQ99638 391 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 TMX1Q9H3N1 280 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 ERVK-5Q9HDB9 667 aa20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 SUCLA2Q9P2R7 463 aaPredicted RBP20.08■□□□□ 0.81
SNRPA1-201ENST00000254193 FXR2P51116 673 aaKnown RBP eCLIP20.07■□□□□ 0.8
SNRPA1-201ENST00000254193 POLGP54098 1239 aaPredicted RBP20.07■□□□□ 0.8
SNRPA1-201ENST00000254193 SLC7A3Q8WY07 619 aa20.07■□□□□ 0.8
SNRPA1-201ENST00000254193 SCLT1Q96NL6 688 aa20.07■□□□□ 0.8
SNRPA1-201ENST00000254193 DHX33Q9H6R0 707 aaKnown RBP20.07■□□□□ 0.8
SNRPA1-201ENST00000254193 ST3GAL5Q9UNP4 418 aa20.07■□□□□ 0.8
SNRPA1-201ENST00000254193 LAMA2P24043 3122 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 SYT1P21579 422 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 RFC5P40937 340 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 TAP1Q03518 808 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 IL17AQ16552 155 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 FAM228AQ86W67 206 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 RHPN2Q8IUC4 686 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 KSR1Q8IVT5 923 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 HSCBQ8IWL3 235 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 ERMNQ8TAM6 284 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 NLRP7Q8WX94 980 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 MYLIPQ8WY64 445 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 TMEM143Q96AN5 459 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 JPH2Q9BR39 696 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 POLR3CQ9BUI4 534 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 FTHL17Q9BXU8 183 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 PRDM12Q9H4Q4 367 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 TUFT1Q9NNX1 390 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 ANKEF1Q9NU02 776 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 LRWD1Q9UFC0 647 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 PPME1Q9Y570 386 aa20.06■□□□□ 0.8
SNRPA1-201ENST00000254193 LAD1O00515 517 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 GPR182O15218 404 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 EIF4BP23588 611 aaKnown RBP20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 EMC2Q15006 297 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 BRAPQ7Z569 592 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 SPRED2Q7Z698 418 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 ZNF710Q8N1W2 664 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 TSPYL2Q9H2G4 693 aaPredicted RBP20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 CERS4Q9HA82 394 aa20.05■□□□□ 0.8
SNRPA1-201ENST00000254193 KAT6AQ92794 2004 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 MGEA5O60502 916 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 CSDE1O75534 798 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 DARSP14868 501 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 FGFR4P22455 802 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 RPA1P27694 616 aa20.04■□□□□ 0.8
SNRPA1-201ENST00000254193 RARRES1P49788 294 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms