RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 CD52P31358 61 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 YWHABP31946 246 aaKnown RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 RFC5P40937 340 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 TXKP42681 527 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 HTRA4P83105 476 aaPredicted RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 CYP4A11Q02928 519 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 TMEM266Q2M3C6 531 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 RILPL1Q5EBL4 403 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 MYOCDQ8IZQ8 938 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 LRRC71Q8N4P6 559 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 SLC7A3Q8WY07 619 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 CDX2Q99626 313 aaPredicted RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 RAD9AQ99638 391 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 EIF2AK1Q9BQI3 630 aaKnown RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 ZBED2Q9BTP6 218 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 WRAP73Q9P2S5 460 aaPredicted RBP14.3□□□□□ -0.12
VPREB3-201ENST00000248948 MYO9BQ13459 2157 aa14.3□□□□□ -0.12
VPREB3-201ENST00000248948 TMEM150BA6NC51 233 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 K7ELQ4 463 aaPredicted RBP14.29□□□□□ -0.12
VPREB3-201ENST00000248948 GPR32O75388 356 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 MAFO75444 373 aaPredicted RBP14.29□□□□□ -0.12
VPREB3-201ENST00000248948 VTNP04004 478 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 MYOGP15173 224 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 ATP2B1P20020 1258 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 PDCP20941 246 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
VPREB3-201ENST00000248948 GPC3P51654 580 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 CDC42EP1Q00587 391 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 HAUS3Q68CZ6 603 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 PLA2G4FQ68DD2 849 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 ERMNQ8TAM6 284 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
VPREB3-201ENST00000248948 TMEM40Q8WWA1 233 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 TOP1MTQ969P6 601 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 OSMRQ99650 979 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 HSD17B14Q9BPX1 270 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 RGL1Q9NZL6 768 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 PADI3Q9ULW8 664 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 INSL6Q9Y581 213 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 ATG2AQ2TAZ0 1938 aa14.29□□□□□ -0.12
VPREB3-201ENST00000248948 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 GPR182O15218 404 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 SLITRK3O94933 977 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 FOSL2P15408 326 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 DNM2P50570 870 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 POLGP54098 1239 aaPredicted RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 GRIN2CQ14957 1233 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 ZNF174Q15697 407 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 MCTP1Q6DN14 999 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 TMCO2Q7Z6W1 182 aaPredicted RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 ZNF410Q86VK4 478 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 LINC01599Q8WXQ3 324 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 CEP170P1Q96L14 293 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 RAB34Q9BZG1 259 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 ADAMTS10Q9H324 1103 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 DHX33Q9H6R0 707 aaKnown RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 SUGCTQ9HAC7 445 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 TUFT1Q9NNX1 390 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
VPREB3-201ENST00000248948 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
VPREB3-201ENST00000248948 EYSQ5T1H1 3165 aa14.27□□□□□ -0.12
VPREB3-201ENST00000248948 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.12
VPREB3-201ENST00000248948 MUTP22033 750 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 PRPHP41219 470 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 NLRP11P59045 1033 aaKnown RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 TAP1Q03518 808 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 NBR1Q14596 966 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 EMC2Q15006 297 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 BRAPQ7Z569 592 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 FAM228AQ86W67 206 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 TPH2Q8IWU9 490 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 MYLIPQ8WY64 445 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 SNX21Q969T3 373 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 CCDC43Q96MW1 224 aaKnown RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 SCLT1Q96NL6 688 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 YME1L1Q96TA2 773 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 GAS2L1Q99501 681 aaPredicted RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 POLR3CQ9BUI4 534 aaPredicted RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 RC3H2Q9HBD1 1191 aaKnown RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 C1orf112Q9NSG2 853 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 ANKEF1Q9NU02 776 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 NOC2LQ9Y3T9 749 aaKnown RBP14.27□□□□□ -0.13
VPREB3-201ENST00000248948 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.13
VPREB3-201ENST00000248948 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
VPREB3-201ENST00000248948 DARSP14868 501 aaKnown RBP14.26□□□□□ -0.13
VPREB3-201ENST00000248948 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms