RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 PGAP2Q9UHJ9 254 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 L1RE1Q9UN81 338 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
LRFN1-201ENST00000248668 PHF20L1A8MW92 1017 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 SLC26A4O43511 780 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 BAG6P46379 1132 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 TAAR1Q96RJ0 339 aa17.25■□□□□ 0.35
LRFN1-201ENST00000248668 TBC1D12O60347 775 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 CASP8Q14790 479 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 SLC18A3Q16572 532 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 HDXQ7Z353 690 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 PRPF38AQ8NAV1 312 aaKnown RBP17.24■□□□□ 0.35
LRFN1-201ENST00000248668 CCDC102AQ96A19 550 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 TLR10Q9BXR5 811 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 EDEM3Q9BZQ6 932 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 SYNPO2Q9UMS6 1093 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
LRFN1-201ENST00000248668 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
LRFN1-201ENST00000248668 SP4Q02446 784 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 ITGB3BPQ13352 177 aaPredicted RBP17.24■□□□□ 0.35
LRFN1-201ENST00000248668 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 OLFML3Q9NRN5 406 aa17.24■□□□□ 0.35
LRFN1-201ENST00000248668 GFPT2O94808 682 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 GAP43P17677 238 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 GTF2A1P52655 376 aaPredicted RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 SPP2Q13103 211 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 EPHA7Q15375 998 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 NBPF12Q5TAG4 269 aaPredicted RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 ZNF720Q7Z2F6 126 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 TMCO5BA8MYB1 307 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 K7ENM7 598 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 RPS6P62753 249 aaKnown RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 MICALL2Q8IY33 904 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 LRRC1Q9BTT6 524 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 NUCKS1Q9H1E3 243 aaKnown RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 HYOU1Q9Y4L1 999 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 MAP2K7O14733 419 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 NOP2P46087 812 aaKnown RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
LRFN1-201ENST00000248668 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 HS2ST1Q7LGA3 356 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 GPRC5CQ9NQ84 441 aa17.23■□□□□ 0.35
LRFN1-201ENST00000248668 ATP8B1O43520 1251 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 FAM193AP78312 1265 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 PRKG1Q13976 671 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 IRF2BP2Q7Z5L9 587 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 DAW1Q8N136 415 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 CCDC43Q96MW1 224 aaKnown RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 TEPSINQ96N21 525 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 RPAP3Q9H6T3 665 aaPredicted RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 VCAM1P19320 739 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 TKFCQ3LXA3 575 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 CBWD6Q4V339 395 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 CBWD3Q5JTY5 395 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 CBWD5Q5RIA9 395 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 DPY19L2P1Q6NXN4 242 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 SPATA4Q8NEY3 305 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 HNRNPLLQ8WVV9 542 aaKnown RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 AGPAT3Q9NRZ7 376 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 AIPL1Q9NZN9 384 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 DMGDHQ9UI17 866 aaKnown RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 ZHX2Q9Y6X8 837 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 EXOC3O60645 756 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 LRRN2O75325 713 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 PSMC2P35998 433 aaKnown RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 GMPSP49915 693 aaPredicted RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 MTMR1Q13613 665 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 IQCEQ6IPM2 695 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 ZSWIM2Q8NEG5 633 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 SYTL5Q8TDW5 730 aaPredicted RBP17.22■□□□□ 0.35
LRFN1-201ENST00000248668 VPS18Q9P253 973 aa17.22■□□□□ 0.35
LRFN1-201ENST00000248668 NFKBIEO00221 500 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 PJA2O43164 708 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 ATP9AO75110 1047 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 HSD17B4P51659 736 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 UGCGQ16739 394 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 ARHGAP44Q17R89 818 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 SYN2Q92777 582 aaPredicted RBP17.21■□□□□ 0.35
LRFN1-201ENST00000248668 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 ZBED3Q96IU2 234 aaPredicted RBP17.21■□□□□ 0.35
LRFN1-201ENST00000248668 METTL14Q9HCE5 456 aaKnown RBP17.21■□□□□ 0.35
LRFN1-201ENST00000248668 SIX2Q9NPC8 291 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 PLA2G4FQ68DD2 849 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 MTMR14Q8NCE2 650 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
LRFN1-201ENST00000248668 RIPK3Q9Y572 518 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms