RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MMP14P50281 582 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 SH2D3AQ9BRG2 576 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 POLR3CQ9BUI4 534 aaPredicted RBP27.88■■■□□ 2.05
RAB40C-201ENST00000248139 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.88■■■□□ 2.05
RAB40C-201ENST00000248139 EVI5O60447 810 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 ARP10275 920 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 STAT2P52630 851 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 JAM2P57087 298 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 C1orf186Q6ZWK4 172 aa27.88■■■□□ 2.05
RAB40C-201ENST00000248139 LNX1Q8TBB1 728 aaPredicted RBP27.88■■■□□ 2.05
RAB40C-201ENST00000248139 SCAF8Q9UPN6 1271 aaKnown RBP27.88■■■□□ 2.05
RAB40C-201ENST00000248139 GOLGA8KD6RF30 607 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 OPA1O60313 960 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 HSPA1LP34931 641 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 PAK2Q13177 524 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 NNTQ13423 1086 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 BORCS6Q96GS4 357 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 FBXO28Q9NVF7 368 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 SHOX2O60902 331 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-201ENST00000248139 PPFIA1Q13136 1202 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 BMT2Q1RMZ1 405 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 IQCKQ8N0W5 287 aa27.87■■■□□ 2.05
RAB40C-201ENST00000248139 TISP43B9A030 160 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 FLOT1O75955 427 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 TNFRSF8P28908 595 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 TBC1D10BQ4KMP7 808 aaPredicted RBP27.86■■■□□ 2.05
RAB40C-201ENST00000248139 NAA35Q5VZE5 725 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 ALS2CLQ60I27 953 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 DAAM2Q86T65 1068 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 H2AFZP0C0S5 128 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 GALCP54803 685 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 ARHGAP44Q17R89 818 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 H2AFVQ71UI9 128 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 PEX26Q7Z412 305 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 ADAT2Q7Z6V5 191 aaKnown RBP27.86■■■□□ 2.05
RAB40C-201ENST00000248139 OR2W6PQ8NHA6 318 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 RUBCNQ92622 972 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 METTL14Q9HCE5 456 aaKnown RBP27.86■■■□□ 2.05
RAB40C-201ENST00000248139 SERPINA10Q9UK55 444 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 GRIN2DO15399 1336 aa27.86■■■□□ 2.05
RAB40C-201ENST00000248139 ATAD5Q96QE3 1844 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 PSMD10O75832 226 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 BCAS4Q8TDM0 211 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 SEPT11Q9NVA2 429 aaKnown RBP27.85■■■□□ 2.05
RAB40C-201ENST00000248139 SAMM50Q9Y512 469 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 GAS7O60861 476 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 MIGA2Q7L4E1 593 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 NEUROG2Q9H2A3 272 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 CENPHQ9H3R5 247 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 PARVGQ9HBI0 331 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 TMEM59LQ9UK28 342 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 NOC2LQ9Y3T9 749 aaKnown RBP27.85■■■□□ 2.05
RAB40C-201ENST00000248139 BZW2Q9Y6E2 419 aaKnown RBP27.85■■■□□ 2.05
RAB40C-201ENST00000248139 PRKCIP41743 596 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 DRAP1Q14919 205 aaPredicted RBP27.85■■■□□ 2.05
RAB40C-201ENST00000248139 PALB2Q86YC2 1186 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 FIZ1Q96SL8 496 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 GLIS2Q9BZE0 524 aaPredicted RBP27.85■■■□□ 2.05
RAB40C-201ENST00000248139 RASSF4Q9H2L5 321 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 DNAJC12Q9UKB3 198 aa27.85■■■□□ 2.05
RAB40C-201ENST00000248139 IGSF9BQ9UPX0 1349 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 YDJCA8MPS7 323 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 ZEB2O60315 1214 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 PSMC2P35998 433 aaKnown RBP27.84■■■□□ 2.05
RAB40C-201ENST00000248139 TNNC1P63316 161 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 ODR4Q5SWX8 454 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 BTNL9Q6UXG8 535 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 UNC45AQ9H3U1 944 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 OLFML3Q9NRN5 406 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 TAS2R14Q9NYV8 317 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 AMACRQ9UHK6 382 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 SLC26A4O43511 780 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 CYP3A4P08684 503 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 COPB2P35606 906 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 FAM178BQ8IXR5 827 aa27.84■■■□□ 2.05
RAB40C-201ENST00000248139 CELF4Q9BZC1 486 aaKnown RBP27.84■■■□□ 2.05
RAB40C-201ENST00000248139 SART1O43290 800 aaKnown RBP27.83■■■□□ 2.05
RAB40C-201ENST00000248139 FLT3P36888 993 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 FMO5P49326 533 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 OLIG1Q8TAK6 271 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 PCIF1Q9H4Z3 704 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 NR2E1Q9Y466 385 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 SLX4Q8IY92 1834 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 SLC16A3O15427 465 aaKnown RBP27.83■■■□□ 2.05
RAB40C-201ENST00000248139 MAATS1Q7Z4T9 603 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 SCFD2Q8WU76 684 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 AKT1S1Q96B36 256 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 MRIQ9BWK5 157 aa27.83■■■□□ 2.05
RAB40C-201ENST00000248139 CHORDC1Q9UHD1 332 aaPredicted RBP27.83■■■□□ 2.05
RAB40C-201ENST00000248139 SHTN1A0MZ66 631 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 GCOM1H8Y6P7 765 aaPredicted RBP27.82■■■□□ 2.04
RAB40C-201ENST00000248139 KRIT1O00522 736 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 POLR2MP0CAP2 368 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 ZBTB48P10074 688 aaPredicted RBP27.82■■■□□ 2.04
RAB40C-201ENST00000248139 ZNF720Q7Z2F6 126 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 F8VZ95 297 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 H0YIN7 160 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 ECHS1P30084 290 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 GUCY1A3Q02108 690 aa27.82■■■□□ 2.04
RAB40C-201ENST00000248139 HOOK2Q96ED9 719 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms