RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 SRRTQ9BXP5 876 aaKnown RBP14.29□□□□□ -0.12
HIF3A-201ENST00000244302 LRRC27Q9C0I9 530 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 ABHD16BQ9H3Z7 469 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
HIF3A-201ENST00000244302 CYP26B1Q9NR63 512 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 RWDD2AQ9UIY3 292 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 FAM13AO94988 1023 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 IGHA2P01877 340 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 OATP04181 439 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 ELNP15502 786 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 RGS2P41220 211 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF75DP51815 510 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 CHMP4BP1P59074 171 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 FANCCQ00597 558 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 SP3Q02447 781 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 P2RX5Q93086 422 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 XPO4Q9C0E2 1151 aaKnown RBP14.29□□□□□ -0.12
HIF3A-201ENST00000244302 INTS13Q9NVM9 706 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 MYH9P35579 1960 aaKnown RBP14.28□□□□□ -0.12
HIF3A-201ENST00000244302 TISP43B9A030 160 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 TBCAO75347 108 aaKnown RBP14.28□□□□□ -0.12
HIF3A-201ENST00000244302 GCNT3O95395 438 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 APTXQ7Z2E3 356 aaKnown RBP14.28□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
HIF3A-201ENST00000244302 PARVGQ9HBI0 331 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 PDLIM7Q9NR12 457 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 ANKEF1Q9NU02 776 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
HIF3A-201ENST00000244302 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 ALDH1A1P00352 501 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 CCNE1P24864 410 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 GUCY2CP25092 1073 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 FCGRTP55899 365 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 PEX3P56589 373 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 BEX3Q00994 111 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 DUSP28Q4G0W2 176 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 XKR3Q5GH77 459 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 CENPPQ6IPU0 288 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 KCNV1Q6PIU1 500 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 CCDC47Q96A33 483 aaKnown RBP14.27□□□□□ -0.12
HIF3A-201ENST00000244302 CCDC43Q96MW1 224 aaKnown RBP14.27□□□□□ -0.12
HIF3A-201ENST00000244302 COL4A3BPQ9Y5P4 624 aa14.27□□□□□ -0.12
HIF3A-201ENST00000244302 PSMA7O14818 248 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 GH1P01241 217 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 GJB1P08034 283 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.13
HIF3A-201ENST00000244302 ZNF131P52739 623 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 PLCB4Q15147 1175 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 CDKAL1Q5VV42 579 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 EPM2AIP1Q7L775 607 aaPredicted RBP14.27□□□□□ -0.13
HIF3A-201ENST00000244302 ZNF720Q7Z2F6 126 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.13
HIF3A-201ENST00000244302 APBA2Q99767 749 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 KCTD10Q9H3F6 313 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 KCNF1Q9H3M0 494 aa14.27□□□□□ -0.13
HIF3A-201ENST00000244302 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
HIF3A-201ENST00000244302 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 TEX33O43247 280 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 LGR5O75473 907 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 LGALS2P05162 132 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 IGBP1P78318 339 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 PSMD2Q13200 908 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 LAMC2Q13753 1193 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
HIF3A-201ENST00000244302 TPD52L1Q16890 204 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-201ENST00000244302 OTUD6AQ7L8S5 288 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-201ENST00000244302 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-201ENST00000244302 C16orf70Q9BSU1 422 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 SLC5A4Q9NY91 659 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 MYADML2A6NDP7 307 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 CLIC2O15247 247 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 SLC16A4O15374 487 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 SERPINC1P01008 464 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-201ENST00000244302 ARID5BQ14865 1188 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 TARBP2Q15633 366 aaKnown RBP14.26□□□□□ -0.13
HIF3A-201ENST00000244302 FAM178BQ8IXR5 827 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 LRRC71Q8N4P6 559 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 CSGALNACT2Q8N6G5 542 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 AFAP1L1Q8TED9 768 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 ADGRA3Q8IWK6 1321 aa14.26□□□□□ -0.13
HIF3A-201ENST00000244302 CDC25BP30305 580 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 MAP2K2P36507 400 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 ZCWPW2Q504Y3 356 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 IQSEC1Q6DN90 963 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 DRC7Q8IY82 874 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 KCTD17Q8N5Z5 321 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 ZSWIM2Q8NEG5 633 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 PPTC7Q8NI37 304 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 ASAP3Q8TDY4 903 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 SOCS4Q8WXH5 440 aa14.25□□□□□ -0.13
HIF3A-201ENST00000244302 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
HIF3A-201ENST00000244302 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms