RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 H2AFZP0C0S5 128 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 FAM86B2P0C5J1 330 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 TCP10Q12799 353 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 ZC2HC1CQ53FD0 456 aaPredicted RBP16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 FOXR2Q6PJQ5 311 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 H2AFVQ71UI9 128 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 NT5DC3Q86UY8 548 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 ZC3H3Q8IXZ2 948 aaKnown RBP16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 PBKQ96KB5 322 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 COA1Q9GZY4 146 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 USP40Q9NVE5 1235 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 PPP1R9AQ9ULJ8 1098 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 SMIM23A6NLE4 172 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 PHF20L1A8MW92 1017 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 BUB1BO60566 1050 aaPredicted RBP16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 GCFC2P16383 781 aaKnown RBP16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 HOXA13P31271 388 aaPredicted RBP16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 PSEN1P49768 467 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 DOK7Q18PE1 504 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 KRT71Q3SY84 523 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 DCAF12L1Q5VU92 463 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 PALB2Q86YC2 1186 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 ERVK-5Q9HDB9 667 aa16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 DDX20Q9UHI6 824 aaKnown RBP16.74■□□□□ 0.27
PCDHB8-201ENST00000239444 ADAMTSL1Q8N6G6 1762 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 MEIS2O14770 477 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 FLOT1O75955 427 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 ARHGAP4P98171 946 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 CCDC13Q8IYE1 715 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 GLG1Q92896 1179 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 SEPT11Q9NVA2 429 aaKnown RBP16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 TAS2R14Q9NYV8 317 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 EVI5O60447 810 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 FSBPO95073 299 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 CUL1Q13616 776 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 TMC3Q7Z5M5 1100 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 FRMD5Q7Z6J6 570 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 UHMK1Q8TAS1 419 aaKnown RBP16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 TRAF3IP3Q9Y228 551 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 STXBP5LQ9Y2K9 1186 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 SUGT1Q9Y2Z0 365 aa16.73■□□□□ 0.27
PCDHB8-201ENST00000239444 SHBGP04278 402 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 MMP14P50281 582 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 EMC10Q5UCC4 262 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 PPP1R18Q6NYC8 613 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 OLIG1Q8TAK6 271 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 ETNPPLQ8TBG4 499 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 ARHGEF26Q96DR7 871 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 JPH2Q9BR39 696 aaPredicted RBP16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 QTRT2Q9H974 415 aaKnown RBP16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 DNM3Q9UQ16 869 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 BRWD3Q6RI45 1802 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 GMNCA6NCL1 334 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 A6NNZ2 444 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 EML1O00423 815 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 LRRN2O75325 713 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 TRIM49P0CI25 452 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 TRIM49CP0CI26 452 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 TUBB8Q3ZCM7 444 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 SLC35G2Q8TBE7 412 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 RAPGEF5Q92565 580 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 LRRC45Q96CN5 670 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 CABS1Q96KC9 395 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 OSBPL7Q9BZF2 842 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 GOPCQ9HD26 462 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 KCNQ5Q9NR82 932 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
PCDHB8-201ENST00000239444 CHMP2AO43633 222 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 JAM2P57087 298 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 CTTNQ14247 550 aaKnown RBP16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 EPM2AIP1Q7L775 607 aaPredicted RBP16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 LENG9Q96B70 501 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 BTNL10A8MVZ5 291 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 DNM1LO00429 736 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 C6orf89Q6UWU4 347 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 LRIG3Q6UXM1 1119 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 SYT2Q8N9I0 419 aaPredicted RBP16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 NENFQ9UMX5 172 aa16.71■□□□□ 0.27
PCDHB8-201ENST00000239444 TRAPPC3O43617 180 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 PRKCIP41743 596 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 PPP2R2AP63151 447 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 BYSLQ13895 437 aaKnown RBP16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 LLGL1Q15334 1064 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 ARHGAP44Q17R89 818 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 MICALCLQ6ZW33 695 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 ATP8B4Q8TF62 1192 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
PCDHB8-201ENST00000239444 PNMA2Q9UL42 364 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms