RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 GREM2Q9H772 168 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
NEK9-201ENST00000238616 DCTN3O75935 186 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 PSMC5P62195 406 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 GRIN1Q05586 938 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
NEK9-201ENST00000238616 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 CC2D1AQ6P1N0 951 aaPredicted RBP14.11□□□□□ -0.15
NEK9-201ENST00000238616 NUDT18Q6ZVK8 323 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 DONSONQ9NYP3 566 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 AIPL1Q9NZN9 384 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 ANGPTL2Q9UKU9 493 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 GUCA1CO95843 209 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 KRT14P02533 472 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 COPB1P53618 953 aaKnown RBP14.11□□□□□ -0.15
NEK9-201ENST00000238616 COPS2P61201 443 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 PDCLQ13371 301 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 USP28Q96RU2 1077 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 TMEM206Q9H813 350 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 SAMSN1Q9NSI8 373 aaKnown RBP14.11□□□□□ -0.15
NEK9-201ENST00000238616 CASP14P31944 242 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 TMPRSS15P98073 1019 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 ZNF699Q32M78 642 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 STK17AQ9UEE5 414 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 TBL3Q12788 808 aaKnown RBP14.11□□□□□ -0.15
NEK9-201ENST00000238616 PKN3Q6P5Z2 889 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 CENPUQ71F23 418 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 SPON2Q9BUD6 331 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 USPL1Q5W0Q7 1092 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 RGS9BPQ6ZS82 235 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 CHMP1BQ7LBR1 199 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 RAET1EQ8TD07 263 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 JRKLQ9Y4A0 524 aa14.11□□□□□ -0.15
NEK9-201ENST00000238616 CARSP49589 748 aaKnown RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 GPATCH4Q5T3I0 446 aaKnown RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 CLDN3O15551 220 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 GTPBP6O43824 516 aaPredicted RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 GAP43P17677 238 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 DEPDC1Q5TB30 811 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 PCDHA4Q9UN74 947 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 ERBB3P21860 1342 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 A0A0D9SFI3 127 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 GSNP06396 782 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 AP1ARQ63HQ0 302 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 OR6P1Q8NGX9 317 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 CCHCR1Q8TD31 782 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 RMDN1Q96DB5 314 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 TRIM33Q9UPN9 1127 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 HUS1O60921 280 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 RBL2Q08999 1139 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 EFTUD2Q15029 972 aaKnown RBP eCLIP14.1□□□□□ -0.15
NEK9-201ENST00000238616 COBLL1Q53SF7 1204 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 ACAD11Q709F0 780 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 GIMAP4Q9NUV9 329 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 CTTNQ14247 550 aaKnown RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 LRRC24Q50LG9 513 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 C1orf131Q8NDD1 294 aaKnown RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 TTC7AQ9ULT0 858 aaPredicted RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 PDHA1P08559 390 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 CPB1P15086 417 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 DYNLL1P63167 89 aaKnown RBP14.1□□□□□ -0.15
NEK9-201ENST00000238616 ZNF568Q3ZCX4 644 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 MRFAP1L1Q96HT8 127 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
NEK9-201ENST00000238616 MAPK13O15264 365 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 TCF3P15923 654 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 CRKLP46109 303 aaKnown RBP14.09□□□□□ -0.15
NEK9-201ENST00000238616 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 DCUN1D1Q96GG9 259 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 USE1Q9NZ43 259 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 MRFAP1Q9Y605 127 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 IRF1P10914 325 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 PRAMEP78395 509 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 MRPL28Q13084 256 aaKnown RBP14.09□□□□□ -0.15
NEK9-201ENST00000238616 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 MOCS2O96007 188 aaPredicted RBP14.09□□□□□ -0.15
NEK9-201ENST00000238616 STX19Q8N4C7 294 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 OSBPL10Q9BXB5 764 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 ARHGAP26Q9UNA1 814 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 MYO1DO94832 1006 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 CA4P22748 312 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 CDC25AP30304 524 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 FAM117BQ6P1L5 589 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 VPS11Q9H270 941 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 TJP2Q9UDY2 1190 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 PRR23D1E9PI22 279 aaPredicted RBP14.09□□□□□ -0.15
NEK9-201ENST00000238616 PRR23D2P0DMB1 279 aaPredicted RBP14.09□□□□□ -0.15
NEK9-201ENST00000238616 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 ZMYND12Q9H0C1 365 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 UNC45AQ9H3U1 944 aa14.09□□□□□ -0.15
NEK9-201ENST00000238616 TADA3O75528 432 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 LCP1P13796 627 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 KRT72Q14CN4 511 aa14.08□□□□□ -0.15
NEK9-201ENST00000238616 MEI1Q5TIA1 1274 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms