RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TBX3O15119 743 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 LSP1P33241 339 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 CUL1Q13616 776 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
CTSD-201ENST00000236671 APOBEC3HQ6NTF7 200 aaKnown RBP16.95■□□□□ 0.3
CTSD-201ENST00000236671 DCAF4Q8WV16 495 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 CALR3Q96L12 384 aaKnown RBP16.95■□□□□ 0.3
CTSD-201ENST00000236671 CCDC17Q96LX7 622 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 POLD4Q9HCU8 107 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 PLAAQ9Y263 795 aa16.95■□□□□ 0.3
CTSD-201ENST00000236671 NDUFAB1O14561 156 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 SLC16A3O15427 465 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 CEP104O60308 925 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 FLOT1O75955 427 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 NR3C1P04150 777 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 EEF2P13639 858 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 GUCY1A3Q02108 690 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 PTPROQ16827 1216 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 SLFN11Q7Z7L1 901 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 ZFPM1Q8IX07 1006 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 MKL1Q969V6 931 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 SLC35C1Q96A29 364 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 TYW1Q9NV66 732 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 SCAF8Q9UPN6 1271 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 NOC2LQ9Y3T9 749 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 ATXN2Q99700 1313 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 HMGB1P1B2RPK0 211 aaPredicted RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 FAM86B1E9PN63 330 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 PGRMC1O00264 195 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 RAD21O60216 631 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 FAM86B2P0C5J1 330 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 CASP4P49662 377 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 CIAPIN1Q6FI81 312 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 MICALL1Q8N3F8 863 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 METTL13Q8N6R0 699 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTSD-201ENST00000236671 METTL14Q9HCE5 456 aaKnown RBP16.94■□□□□ 0.3
CTSD-201ENST00000236671 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
CTSD-201ENST00000236671 GMPSP49915 693 aaPredicted RBP16.93■□□□□ 0.3
CTSD-201ENST00000236671 LIG3P49916 1009 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 ITGB3BPQ13352 177 aaPredicted RBP16.93■□□□□ 0.3
CTSD-201ENST00000236671 HLTFQ14527 1009 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTSD-201ENST00000236671 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 LRIG3Q6UXM1 1119 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 RUSC1Q9BVN2 902 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 AP1M1Q9BXS5 423 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 BCAS3Q9H6U6 928 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 VAV3Q9UKW4 847 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 A0A0A6YYK5 440 aaPredicted RBP16.93■□□□□ 0.3
CTSD-201ENST00000236671 DDX3XO00571 662 aaKnown RBP eCLIP16.93■□□□□ 0.32e-21■■■■□ 22.5
CTSD-201ENST00000236671 SREBF1P36956 1147 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 HSD17B3P37058 310 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 UAP1Q16222 522 aaPredicted RBP16.93■□□□□ 0.3
CTSD-201ENST00000236671 CEP85LQ5SZL2 805 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 TCERG1LQ5VWI1 586 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 GJB7Q6PEY0 223 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 MAATS1Q7Z4T9 603 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 RASGEF1CQ8N431 466 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 OLIG1Q8TAK6 271 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 EPN3Q9H201 632 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 VPS33BQ9H267 617 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 NEUROG2Q9H2A3 272 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 TMBIM4Q9HC24 238 aa16.93■□□□□ 0.3
CTSD-201ENST00000236671 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 H0YGN5 161 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 SART1O43290 800 aaKnown RBP16.92■□□□□ 0.3
CTSD-201ENST00000236671 PPP1R37O75864 691 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 ERLIN2O94905 339 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 RPL13P26373 211 aaKnown RBP16.92■□□□□ 0.3
CTSD-201ENST00000236671 SNAP25P60880 206 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 KCNA1Q09470 495 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 PTGISQ16647 500 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 B4GALNT4Q76KP1 1039 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 PEX26Q7Z412 305 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 DDX42Q86XP3 938 aaKnown RBP eCLIP16.92■□□□□ 0.3
CTSD-201ENST00000236671 TEKT1Q969V4 418 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 FAM20AQ96MK3 541 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 BHMT2Q9H2M3 363 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 NYAP2Q9P242 653 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 SUCLA2Q9P2R7 463 aaPredicted RBP16.92■□□□□ 0.3
CTSD-201ENST00000236671 NFS1Q9Y697 457 aa16.92■□□□□ 0.3
CTSD-201ENST00000236671 POLR2AP24928 1970 aaKnown RBP16.92■□□□□ 0.3
CTSD-201ENST00000236671 GTPBP10A4D1E9 387 aaKnown RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 MSH4O15457 936 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 GCNT3O95395 438 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
CTSD-201ENST00000236671 H2AFZP0C0S5 128 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 STRIP1Q5VSL9 837 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 NAA35Q5VZE5 725 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 MCTP2Q6DN12 878 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 H2AFVQ71UI9 128 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 SIAH1Q8IUQ4 282 aa16.91■□□□□ 0.3
CTSD-201ENST00000236671 KAT2BQ92831 832 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms