RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
FRG1-201ENST00000226798 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 RASGRP4Q8TDF6 673 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 SNX27Q96L92 541 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 ADAM2Q99965 735 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 LZTS1Q9Y250 596 aa13.2□□□□□ -0.3
FRG1-201ENST00000226798 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 DNAH14Q0VDD8 3507 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 MEIS1O00470 390 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 ST18O60284 1047 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 HBP1O60381 514 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 IBSPP21815 317 aaPredicted RBP13.19□□□□□ -0.3
FRG1-201ENST00000226798 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 CCDC60Q8IWA6 550 aaPredicted RBP13.19□□□□□ -0.3
FRG1-201ENST00000226798 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 FANCBQ8NB91 859 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 PGBD1Q96JS3 809 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 S1PR5Q9H228 398 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 CWH43Q9H720 699 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
FRG1-201ENST00000226798 TMEM161AQ9NX61 479 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 ST3GAL5Q9UNP4 418 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 MYO10Q9HD67 2058 aa13.19□□□□□ -0.3
FRG1-201ENST00000226798 FAM186AA6NE01 2351 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
FRG1-201ENST00000226798 FGFR1P11362 822 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 LAG3P18627 525 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 SREBF1P36956 1147 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 FAM189BP81408 668 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 DSC3Q14574 896 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 SPOUT1Q5T280 376 aaKnown RBP13.18□□□□□ -0.3
FRG1-201ENST00000226798 ANKRD54Q6NXT1 300 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 ANO3Q9BYT9 981 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
FRG1-201ENST00000226798 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
FRG1-201ENST00000226798 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 CACNA1AO00555 2505 aa13.18□□□□□ -0.3
FRG1-201ENST00000226798 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 DENND4AQ7Z401 1863 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 SLC27A2O14975 620 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 SNPHO15079 494 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 GPR182O15218 404 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 DHX15O43143 795 aaKnown RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 C22orf31O95567 290 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 SRGAP2BP0DMP2 458 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 ATP4AP20648 1035 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 NAPAP54920 295 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 FUT2Q10981 343 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 FAM160B1Q5W0V3 765 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 NIPA1Q7RTP0 329 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 OSMRQ99650 979 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
FRG1-201ENST00000226798 LRRC2Q9BYS8 371 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 ATP6V0A4Q9HBG4 840 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 RNF19AQ9NV58 838 aa13.17□□□□□ -0.3
FRG1-201ENST00000226798 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
FRG1-201ENST00000226798 BACH1O14867 736 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 GPR32O75388 356 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 FAM86B2P0C5J1 330 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 AVPR2P30518 371 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 TECP42680 631 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 ADCY7P51828 1080 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
FRG1-201ENST00000226798 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms