RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SYCP3Q8IZU3 236 aa15.96■□□□□ 0.15
CNOT3-201ENST00000221232 INPP4AQ96PE3 977 aaPredicted RBP15.96■□□□□ 0.15
CNOT3-201ENST00000221232 EVI5O60447 810 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 KIF4AO95239 1232 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 CIITAP33076 1130 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 ITIH3Q06033 890 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 CFAP58Q5T655 872 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 C1orf186Q6ZWK4 172 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 PEX26Q7Z412 305 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 METTL13Q8N6R0 699 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 USP38Q8NB14 1042 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 HOOK2Q96ED9 719 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 UNC45AQ9H3U1 944 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 PARVGQ9HBI0 331 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 HOMER2Q9NSB8 354 aa15.96■□□□□ 0.14
CNOT3-201ENST00000221232 TMEM150BA6NC51 233 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 ZEB2O60315 1214 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 IVLP07476 585 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 H2AFZP0C0S5 128 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 COPB2P35606 906 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 GNGT1P63211 74 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 DGKZQ13574 1117 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 DRAP1Q14919 205 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-201ENST00000221232 H2AFVQ71UI9 128 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 CPXCR1Q8N123 301 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 POLR3CQ9BUI4 534 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-201ENST00000221232 TRIM31Q9BZY9 425 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 TMEM39BQ9GZU3 492 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 DNAJC12Q9UKB3 198 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 FLOT1O75955 427 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 PSMC2P35998 433 aaKnown RBP15.95■□□□□ 0.14
CNOT3-201ENST00000221232 IRAK1P51617 712 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 GALCP54803 685 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 EMBQ6PCB8 327 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 SRLQ86TD4 932 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 OR2W6PQ8NHA6 318 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 ELMO3Q96BJ8 720 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 AGBL1Q96MI9 1066 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 PLCB1Q9NQ66 1216 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 FEZ2Q9UHY8 353 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-201ENST00000221232 SAMM50Q9Y512 469 aa15.95■□□□□ 0.14
CNOT3-201ENST00000221232 ARFGEF1Q9Y6D6 1849 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 TULP2O00295 520 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 PSMD10O75832 226 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 CCT5P48643 541 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 MAATS1Q7Z4T9 603 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 TPCN2Q8NHX9 752 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 CAPS2Q9BXY5 557 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 METTL14Q9HCE5 456 aaKnown RBP15.94■□□□□ 0.14
CNOT3-201ENST00000221232 SHTN1A0MZ66 631 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 EXOC3O60645 756 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 USP8P40818 1118 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 PDCLQ13371 301 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 LNX1Q8TBB1 728 aaPredicted RBP15.94■□□□□ 0.14
CNOT3-201ENST00000221232 GDF3Q9NR23 364 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 TAS2R14Q9NYV8 317 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 AMACRQ9UHK6 382 aa15.94■□□□□ 0.14
CNOT3-201ENST00000221232 OPA1O60313 960 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 STAT1P42224 750 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 NNTQ13423 1086 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ZNF720Q7Z2F6 126 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ZSWIM2Q8NEG5 633 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 CELF4Q9BZC1 486 aaKnown RBP15.93■□□□□ 0.14
CNOT3-201ENST00000221232 TMOD2Q9NZR1 351 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ZMYM2Q9UBW7 1377 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ZNF233A6NK53 670 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 KRIT1O00522 736 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 HOXA7P31268 230 aaPredicted RBP15.93■□□□□ 0.14
CNOT3-201ENST00000221232 MMP14P50281 582 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 PRELPP51888 382 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 DLG4P78352 724 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 PAK2Q13177 524 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 CEP55Q53EZ4 464 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 HS2ST1Q7LGA3 356 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 VPS36Q86VN1 386 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 PALB2Q86YC2 1186 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 LXNQ9BS40 222 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 FMO5P49326 533 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ERVK-9P63128 1117 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 HDLBPQ00341 1268 aaKnown RBP15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ZNF211Q13398 564 aaPredicted RBP15.93■□□□□ 0.14
CNOT3-201ENST00000221232 BTNL9Q6UXG8 535 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 BCAS4Q8TDM0 211 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 MRIQ9BWK5 157 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 BCCIPQ9P287 314 aaKnown RBP eCLIP15.93■□□□□ 0.14
CNOT3-201ENST00000221232 RNF14Q9UBS8 474 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 FRMD4BQ9Y2L6 1034 aa15.93■□□□□ 0.14
CNOT3-201ENST00000221232 BZW2Q9Y6E2 419 aaKnown RBP15.93■□□□□ 0.14
CNOT3-201ENST00000221232 FOCADQ5VW36 1801 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 ARHGEF35A5YM69 484 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 TMEM110-MUSTN1A8MSY1 372 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 SART1O43290 800 aaKnown RBP15.92■□□□□ 0.14
CNOT3-201ENST00000221232 PPP1R12BO60237 982 aaPredicted RBP15.92■□□□□ 0.14
CNOT3-201ENST00000221232 HIP1RO75146 1068 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 CYP3A4P08684 503 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 TNNC1P63316 161 aa15.92■□□□□ 0.14
CNOT3-201ENST00000221232 LLGL1Q15334 1064 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms