RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 M0QYV0 167 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 CYP2D6P10635 497 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 CCT5P48643 541 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 PAPOLAP51003 745 aaKnown RBP11.89□□□□□ -0.51
KNOP1-201ENST00000219837 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 FBXO18Q8NFZ0 1043 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 PIGBQ92521 554 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 TRIM4Q9C037 500 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 SP110Q9HB58 689 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 A0A087WWV3 80 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 E5RI56 91 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 KITP10721 976 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 DPCR1Q3MIW9 517 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 SPATA33Q96N06 139 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 FAM213AQ9BRX8 229 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 EDEM3Q9BZQ6 932 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 ASNSD1Q9NWL6 643 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 NEDD4P46934 1319 aa11.89□□□□□ -0.51
KNOP1-201ENST00000219837 GOLGA8MH3BSY2 632 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 ATICP31939 592 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 DDX53Q86TM3 631 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 ZNF668Q96K58 619 aaPredicted RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 SRPRBQ9Y5M8 271 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 METP08581 1390 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 MYL1P05976 194 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 CYP21A2P08686 494 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 IFT88Q13099 833 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 EFHD1Q9BUP0 239 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 ZMYND12Q9H0C1 365 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 PCDHA5Q9Y5H7 936 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 UBE4BO95155 1302 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 DFFAO00273 331 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 CLDN3O15551 220 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 HDLBPQ00341 1268 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 MB21D1Q8N884 522 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 OSBP2Q969R2 916 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 CFAP69A5D8W1 941 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 NNMTP40261 264 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 FKBP3Q00688 224 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 DHX9Q08211 1270 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 TTLL4Q14679 1199 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 TDRD3Q9H7E2 651 aaKnown RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 SLC16A4O15374 487 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 PYGLP06737 847 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 YIPF2Q9BWQ6 316 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
KNOP1-201ENST00000219837 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
KNOP1-201ENST00000219837 LRRC31Q6UY01 552 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
KNOP1-201ENST00000219837 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
KNOP1-201ENST00000219837 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 SERPINI1Q99574 410 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 COG4Q9H9E3 785 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 SAYSD1Q9NPB0 183 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 NGRNQ9NPE2 291 aaKnown RBP11.87□□□□□ -0.51
KNOP1-201ENST00000219837 TMCC1O94876 653 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 PYCARDQ9ULZ3 195 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 CAPN11Q9UMQ6 739 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 PACSIN2Q9UNF0 486 aaPredicted RBP11.87□□□□□ -0.51
KNOP1-201ENST00000219837 HEY1Q9Y5J3 304 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
KNOP1-201ENST00000219837 LCP1P13796 627 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 TAS2R42Q7RTR8 314 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 SH3KBP1Q96B97 665 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 MID2Q9UJV3 735 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 ARHGEF5Q12774 1597 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 SETSIPP0DME0 302 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 RWDD2BP57060 319 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 ZNF212Q9UDV6 495 aa11.87□□□□□ -0.51
KNOP1-201ENST00000219837 AP3B2Q13367 1082 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 MAPK6Q16659 721 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 SWSAP1Q6NVH7 229 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 RAD54LQ92698 747 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 CLCA2Q9UQC9 943 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 L3MBTL1Q9Y468 752 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
KNOP1-201ENST00000219837 CPB1P15086 417 aa11.86□□□□□ -0.51
KNOP1-201ENST00000219837 GCKP35557 465 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms