RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 GH1P01241 217 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 ABCB4P21439 1286 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 COG7P83436 770 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 NAB2Q15742 525 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 CNGA2Q16280 664 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 METTL24Q5JXM2 366 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 SPTY2D1Q68D10 685 aaPredicted RBP15.81■□□□□ 0.12
PTPRA-201ENST00000216877 PTF1AQ7RTS3 328 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 FBXL16Q8N461 479 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 FBXO41Q8TF61 875 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 SMC6Q96SB8 1091 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 TBC1D10AQ9BXI6 508 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 MYLK2Q9H1R3 596 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 SERPINA10Q9UK55 444 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 RNMTO43148 476 aaKnown RBP15.81■□□□□ 0.12
PTPRA-201ENST00000216877 UNC5CO95185 931 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 BRAFP15056 766 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 MMP13P45452 471 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 CENPTQ96BT3 561 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 PYM1Q9BRP8 204 aaKnown RBP15.81■□□□□ 0.12
PTPRA-201ENST00000216877 MAF1Q9H063 256 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 TBC1D7Q9P0N9 293 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 GSTTP1A0A1W2PQM5 241 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 PRKAB2O43741 272 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 CA8P35219 290 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 PSMC4P43686 418 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 ZBTB16Q05516 673 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 ASIC2Q16515 512 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 BARGINQ6ZT62 677 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
PTPRA-201ENST00000216877 BTG4Q9NY30 223 aa15.81■□□□□ 0.12
PTPRA-201ENST00000216877 ZNF335Q9H4Z2 1342 aaPredicted RBP15.81■□□□□ 0.12
PTPRA-201ENST00000216877 MAGEA13PA6NCF6 341 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 TLCD1Q96CP7 247 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 DHTKD1Q96HY7 919 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 KIAA1683Q9H0B3 1180 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 NT5C3AQ9H0P0 336 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 PABPC3Q9H361 631 aaKnown RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 DDX18Q9NVP1 670 aaKnown RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 SLAIN2Q9P270 581 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 CCDC194A0A1B0GVG4 234 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 GSTA2P09210 222 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 GM2AP17900 193 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 SLC4A8Q2Y0W8 1093 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 CNPY1Q3B7I2 92 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 SH2D4BQ5SQS7 431 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 UBAP2Q5T6F2 1119 aaKnown RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 FOXB2Q5VYV0 432 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 ANKRD23Q86SG2 305 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 RNF25Q96BH1 459 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 DENND2DQ9H6A0 471 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 DISC1Q9NRI5 854 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 PLCH1Q4KWH8 1693 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 KRT36O76013 467 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 POLD1P28340 1107 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 PDCD7Q8N8D1 485 aaKnown RBP15.8■□□□□ 0.12
PTPRA-201ENST00000216877 ERGIC2Q96RQ1 377 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 TTC1Q99614 292 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 CENPKQ9BS16 269 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 CLIC5Q9NZA1 410 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
PTPRA-201ENST00000216877 MAP3K15Q6ZN16 1313 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 FAM196BA6NMK8 535 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 ACADSP16219 412 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 VPS41P49754 854 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 MIIPQ5JXC2 388 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 TRAPPC9Q96Q05 1148 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 A6NJR5 290 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 TMCC1O94876 653 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 AGTP01019 485 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 DNAJC3Q13217 504 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 KHDC1Q4VXA5 237 aaKnown RBP15.79■□□□□ 0.12
PTPRA-201ENST00000216877 AKAP4Q5JQC9 854 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 OR52E8Q6IFG1 317 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.79■□□□□ 0.123e-6■■■■■ 69.6
PTPRA-201ENST00000216877 TCP11L1Q9NUJ3 509 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 RTCBQ9Y3I0 505 aaKnown RBP15.79■□□□□ 0.12
PTPRA-201ENST00000216877 NR2E1Q9Y466 385 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 TJP3O95049 919 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 GNA14O95837 355 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 GNAT2P19087 354 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 CBX3Q13185 183 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 SGSM1Q2NKQ1 1148 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 AGGF1Q8N302 714 aaeCLIP15.79■□□□□ 0.12
PTPRA-201ENST00000216877 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
PTPRA-201ENST00000216877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■■■■■ 44.1
PTPRA-201ENST00000216877 UTP4Q969X6 686 aaKnown RBP15.79■□□□□ 0.12
PTPRA-201ENST00000216877 MPP4Q96JB8 637 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 CTNNAL1Q9UBT7 734 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 DCTN4Q9UJW0 460 aa15.79■□□□□ 0.12
PTPRA-201ENST00000216877 SERPING1P05155 500 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 PLCG2P16885 1265 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 GNAZP19086 355 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 IGBP1P78318 339 aa15.78■□□□□ 0.12
PTPRA-201ENST00000216877 MAN2A1Q16706 1144 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms