RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 BACH1O14867 736 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 CYLC1P35663 651 aaPredicted RBP15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 PSMC2P35998 433 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 KRT83P78385 493 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 ANO5Q75V66 913 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 C12orf56Q8IXR9 622 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 SMCR8Q8TEV9 937 aaPredicted RBP15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 CCDC43Q96MW1 224 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 EIF3CQ99613 913 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 C17orf75Q9HAS0 396 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 PLCB1Q9NQ66 1216 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 AGPAT3Q9NRZ7 376 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 MYO1AQ9UBC5 1043 aa15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 REXO2Q9Y3B8 237 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-201ENST00000023939 GTPBP10A4D1E9 387 aaKnown RBP15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 FANCGO15287 622 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 USO1O60763 962 aaKnown RBP15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 NOL4O94818 638 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 ATG7O95352 703 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 AFPP02771 609 aaKnown RBP15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 OSBPP22059 807 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 ARHGAP25P42331 645 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 ACTR2P61160 394 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 GNG11P61952 73 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 GTF2BQ00403 316 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 CNTN2Q02246 1040 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 XKR9Q5GH70 373 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 GPAT2Q6NUI2 795 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 MIS18BP1Q6P0N0 1132 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 PDXDC1Q6P996 788 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 ACRBPQ8NEB7 543 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 GABBR1Q9UBS5 961 aa15.71■□□□□ 0.11
RTFDC1-201ENST00000023939 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 KIF5CO60282 957 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 ZNF862O60290 1169 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 NCKAP1LP55160 1127 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 RTP1P59025 263 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 GPR162Q16538 588 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 DPY19L2P1Q6NXN4 242 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 NCAPG2Q86XI2 1143 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 SLC35C1Q96A29 364 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 HVCN1Q96D96 273 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 ACCSQ96QU6 501 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 NHEJ1Q9H9Q4 299 aaPredicted RBP15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 RBPJLQ9UBG7 517 aa15.71■□□□□ 0.1
RTFDC1-201ENST00000023939 KIAA1217Q5T5P2 1943 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 IGSF9BQ9UPX0 1349 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 LOC102724159A0A0B4J2E5 919 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 K7ENM7 598 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 SUPT20HL2P0C7V6 817 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 TGFB3P10600 412 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 ERCC3P19447 782 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 CASP4P49662 377 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 MCCD1P59942 119 aaPredicted RBP15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 PPP2R5AQ15172 486 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 PWP2Q15269 919 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 UTP14CQ5TAP6 766 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 FAM186BQ8IYM0 893 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 GTF3C2Q8WUA4 911 aaPredicted RBP15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 SPIRE2Q8WWL2 714 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 KIFAP3Q92845 792 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 WDR24Q96S15 920 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 NTPCRQ9BSD7 190 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 LSM14BQ9BX40 385 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 GANQ9H2C0 597 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 HAUS4Q9H6D7 363 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 PDLIM7Q9NR12 457 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 FBXL5Q9UKA1 691 aa15.7■□□□□ 0.1
RTFDC1-201ENST00000023939 IGKV6D-21A0A0A0MT36 114 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 SSU72P8A0A1W2PR75 194 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 CLIC2O15247 247 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 LCA5LO95447 670 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 CASQ1P31415 396 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 NPEPPSP55786 919 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 SP2Q02086 613 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 ARHGAP29Q52LW3 1261 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 EAPPQ56P03 285 aaPredicted RBP15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 XKR3Q5GH77 459 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 SWSAP1Q6NVH7 229 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 RRAGAQ7L523 313 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 CACNA2D4Q7Z3S7 1137 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 SHCBP1Q8NEM2 672 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 KCNN1Q92952 543 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 LZTFL1Q9NQ48 299 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 MYO6Q9UM54 1294 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 FRMD4BQ9Y2L6 1034 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 MYH11P35749 1972 aa15.69■□□□□ 0.1
RTFDC1-201ENST00000023939 DNAJC25-GNG10A0A024R161 153 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 TMEM150BA6NC51 233 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 LRRC53A6NM62 1247 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 MAPK13O15264 365 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 PEX10O60683 326 aa15.68■□□□□ 0.1
RTFDC1-201ENST00000023939 DGAT1O75907 488 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms