RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Gnat1P20612 350 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Znf367Q0VDT2 340 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Yipf3Q3UDR8 347 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Eme2Q56A04 373 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Serpinb1cQ5SV42 375 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Klra8Q60682 266 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Zdhhc24Q6IR37 284 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Champ1Q8K327 802 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Bud13Q8R149 637 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 SmtnQ921U8 923 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ino80bQ99PT3 375 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Josd2Q9CR30 188 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Krt34Q9D646 392 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cog1Q9Z160 980 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 EvplQ9D952 2035 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Magea10A2AMW4 325 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Fam71aB7XG49 585 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 CflarO35732 481 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 ClppO88696 272 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 M6prP24668 278 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Eef2P58252 858 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 ChukQ60680 745 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rgl2Q61193 778 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Slx1bQ8BX32 270 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Proser2Q8C5R2 471 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Caap1Q8VDY9 356 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Xpo6Q924Z6 1125 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 HibadhQ99L13 335 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 1700109H08RikQ9D9C0 210 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Akap8lQ9R0L7 642 aaKnown RBP12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Pex11aQ9Z211 246 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 GakQ99KY4 1305 aa12.41□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ttc38A3KMP2 465 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Krt87Q6IMF0 495 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ttc7aQ8BGB2 858 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Abcf3Q8K268 709 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 HgsQ99LI8 775 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Kif17Q99PW8 1038 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Trmt112Q9DCG9 125 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Jph2Q9ET78 696 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cfap44E9Q5M6 1843 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 A0A286YCQ6 122 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Pdia2D3Z6P0 527 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cd151O35566 253 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 AfpP02772 605 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Epha3P29319 983 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Rps8P62242 208 aaKnown RBP12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Psmc6P62334 389 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Psg29Q3URN6 468 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Ttbk2Q3UVR3 1243 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Krt9Q6RHW0 743 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 AdalQ80SY6 360 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Skor1Q8BX46 964 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Agap1Q8BXK8 857 aaKnown RBP12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cadps2Q8BYR5 1297 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Pkn3Q8K045 878 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Q91Z58 1206 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Gimap4Q99JY3 219 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Zfyve19Q9DAZ9 389 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Edf1Q9JMG1 148 aaKnown RBP12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Cul1Q9WTX6 776 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Net1Q9Z206 595 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Lrp5Q91VN0 1614 aa12.4□□□□□ -0.42
Prpf40b-208ENSMUST00000136980 Pgrmc1O55022 195 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Slurp2P0DP59 97 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 RpsaP14206 295 aaKnown RBP12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 SlmapQ3URD3 845 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Hook3Q8BUK6 718 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Shtn1Q8K2Q9 631 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Cdk8Q8R3L8 464 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ttc14Q9CSP9 761 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rsrc1Q9DBU6 334 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Morc1Q9WVL5 950 aa12.4□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Zfp105G3X9I0 524 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ppfibp2O35711 882 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Pja1O55176 578 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ugt1a2P70691 533 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Snai1Q02085 264 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Klrb1Q0ZUP1 214 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rrp36Q3UFY0 244 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Adad1Q5SUE7 619 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Adat2Q6P6J0 191 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Stk38lQ7TSE6 464 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Cnot10Q8BH15 744 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 GlmnQ8BZM1 596 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Arhgap18Q8K0Q5 663 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Dennd1aQ8K382 1016 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Rnf112Q96DY5 654 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 NapaQ9DB05 295 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Klhl41A2AUC9 606 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ap1b1O35643 943 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Orc4O88708 433 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Lmnb1P14733 588 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Kif5cP28738 956 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Pstpip1P97814 415 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Creb1Q01147 341 aaKnown RBP12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Ccdc69Q3TCJ8 202 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Krt14Q61781 484 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Fam210aQ8BGY7 273 aa12.39□□□□□ -0.43
Prpf40b-208ENSMUST00000136980 Cwf19l1Q8CI33 537 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms