RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PRR16Q569H4 304 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 MIS18BP1Q6P0N0 1132 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 CMTR2Q8IYT2 770 aaKnown RBP18.97■□□□□ 0.63
PHGDH-213ENST00000641272 CRYGNQ8WXF5 182 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 OSMRQ99650 979 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 LMAN2LQ9H0V9 348 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 C6orf50Q9HD87 102 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 HCSTQ9UBK5 93 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 LRFN2Q9ULH4 789 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 NOC2LQ9Y3T9 749 aaKnown RBP18.97■□□□□ 0.63
PHGDH-213ENST00000641272 KDM3AQ9Y4C1 1321 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 COL1A2P08123 1366 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 ZBTB42B2RXF5 422 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 TBX10O75333 385 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 ITGB1P05556 798 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 RPS6KB1P23443 525 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 DNAJB1P25685 340 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 HSPA4P34932 840 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 LTBRP36941 435 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 SETQ01105 290 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-213ENST00000641272 COL19A1Q14993 1142 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 KIZQ2M2Z5 673 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 TEX2Q8IWB9 1127 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 SLC26A6Q9BXS9 759 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 ZMYND12Q9H0C1 365 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 NCOA5Q9HCD5 579 aaKnown RBP18.96■□□□□ 0.63
PHGDH-213ENST00000641272 ERVK-5Q9HDB9 667 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 VPS54Q9P1Q0 977 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 PCDHGC5Q9Y5F6 944 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 SQORQ9Y6N5 450 aa18.96■□□□□ 0.63
PHGDH-213ENST00000641272 RPS6KA5O75582 802 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 C22orf31O95567 290 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 VTNP04004 478 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 CYP3A4P08684 503 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 STAG3L1P0CL83 205 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 IRS1P35568 1242 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 PLA2G5P39877 138 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 CLCN3P51790 818 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 CCT2P78371 535 aaKnown RBP18.95■□□□□ 0.62
PHGDH-213ENST00000641272 CAMK1Q14012 370 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 ADGRD2Q7Z7M1 963 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 KIAA0319LQ8IZA0 1049 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 CRIPAKQ8N1N5 446 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 CCDC12Q8WUD4 166 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-213ENST00000641272 KCNB2Q92953 911 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 GABBR1Q9UBS5 961 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
PHGDH-213ENST00000641272 DENND3A2RUS2 1198 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 PRPF3O43395 683 aaKnown RBP18.94■□□□□ 0.62
PHGDH-213ENST00000641272 CHMP2AO43633 222 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 SARSP49591 514 aaKnown RBP18.94■□□□□ 0.62
PHGDH-213ENST00000641272 AKAP17AQ02040 695 aaKnown RBP18.94■□□□□ 0.62
PHGDH-213ENST00000641272 PUS10Q3MIT2 529 aaKnown RBP18.94■□□□□ 0.62
PHGDH-213ENST00000641272 ZNF484Q5JVG2 852 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 FAM228AQ86W67 206 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 METTL13Q8N6R0 699 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 KLHL23Q8NBE8 558 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 FAM122AQ96E09 287 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 ZNF668Q96K58 619 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-213ENST00000641272 PLVAPQ9BX97 442 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 HCN4Q9Y3Q4 1203 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 SAMM50Q9Y512 469 aa18.94■□□□□ 0.62
PHGDH-213ENST00000641272 TBKBP1A7MCY6 615 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 PI4K2BG5E9Z4 385 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 NDUFV1P49821 464 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 ZP2Q05996 745 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 SPOUT1Q5T280 376 aaKnown RBP18.93■□□□□ 0.62
PHGDH-213ENST00000641272 ZNF746Q6NUN9 644 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-213ENST00000641272 NME8Q8N427 588 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 POF1BQ8WVV4 589 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 P2RX5Q93086 422 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 GJA10Q969M2 543 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 LENG9Q96B70 501 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 ADAM2Q99965 735 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 ST3GAL5Q9UNP4 418 aa18.93■□□□□ 0.62
PHGDH-213ENST00000641272 PSAPP07602 524 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 FGFR1P11362 822 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 NTRK3Q16288 839 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 CTC1Q2NKJ3 1217 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 LRRC71Q8N4P6 559 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 CCDC148Q8NFR7 591 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 SPPL3Q8TCT6 385 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 BBXQ8WY36 941 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-213ENST00000641272 TBC1D22BQ9NU19 505 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 AKT3Q9Y243 479 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 FAM50BQ9Y247 325 aa18.92■□□□□ 0.62
PHGDH-213ENST00000641272 MBTPS2O43462 519 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 GPR37L1O60883 481 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 GNA11P29992 359 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 UGCGQ16739 394 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 FAM102BQ5T8I3 360 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 RBM23Q86U06 439 aaKnown RBP18.91■□□□□ 0.62
PHGDH-213ENST00000641272 SMAP1Q8IYB5 467 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-213ENST00000641272 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 RNF26Q9BY78 433 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-213ENST00000641272 PCDHB7Q9Y5E2 793 aa18.91■□□□□ 0.62
PHGDH-213ENST00000641272 MAFBQ9Y5Q3 323 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-213ENST00000641272 WDR64B1ANS9 1081 aa18.9■□□□□ 0.62
PHGDH-213ENST00000641272 NRIP1P48552 1158 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms