RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 HES6Q96HZ4 224 aa14.92□□□□□ -0.02
PAX6-280ENST00000640872 RTFDC1Q9BY42 306 aaPredicted RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 CELF4Q9BZC1 486 aaKnown RBP14.92□□□□□ -0.02
PAX6-280ENST00000640872 KIF1CO43896 1103 aaKnown RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 CYP11B2P19099 503 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 NR2F2P24468 414 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 PON1P27169 355 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 FAM196AQ6ZSG2 479 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 FRMD5Q7Z6J6 570 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 HVCN1Q96D96 273 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 GJD4Q96KN9 370 aaPredicted RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 XPO6Q96QU8 1125 aaKnown RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 FAM129AQ9BZQ8 928 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 SWAP70Q9UH65 585 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 TTC7AQ9ULT0 858 aaPredicted RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 ARFGEF1Q9Y6D6 1849 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 MGRN1O60291 552 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 AFPP02771 609 aaKnown RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 H2AFZP0C0S5 128 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 CHRM1P11229 460 aaPredicted RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 NF2P35240 595 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 PSEN1P49768 467 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 NPEPPSP55786 919 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 EIF3BP55884 814 aaKnown RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 IFFO1Q0D2I5 559 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 H2AFVQ71UI9 128 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 CPLX4Q7Z7G2 160 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 GPBP1Q86WP2 473 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 TEX2Q8IWB9 1127 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 SYCE1Q8N0S2 351 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 CHMP6Q96FZ7 201 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 GPR101Q96P66 508 aaPredicted RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 DPH5Q9H2P9 285 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 AJAP1Q9UKB5 411 aaPredicted RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 INTUQ9ULD6 942 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 ODF2LQ9ULJ1 636 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 SUFUQ9UMX1 484 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 KIAA1024Q9UPX6 916 aa14.91□□□□□ -0.02
PAX6-280ENST00000640872 UTP11Q9Y3A2 253 aaKnown RBP14.91□□□□□ -0.02
PAX6-280ENST00000640872 ZNF831Q5JPB2 1677 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 TNRC6CQ9HCJ0 1690 aaKnown RBP14.9□□□□□ -0.02
PAX6-280ENST00000640872 JAM2P57087 298 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 UBE2SQ16763 222 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 PPP1R18Q6NYC8 613 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 MDM1Q8TC05 714 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 NYXQ9GZU5 481 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 EPB41L4BQ9H329 900 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 SIX2Q9NPC8 291 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 PCDHA12Q9UN75 941 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 TRAF3IP3Q9Y228 551 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 CEP83Q9Y592 693 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 POTEB3A0JP26 581 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 POTECB2RU33 542 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 DDX3XO00571 662 aaKnown RBP eCLIP14.9□□□□□ -0.02
PAX6-280ENST00000640872 OPLAHO14841 1288 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 PPIP5K2O43314 1243 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 NFIXQ14938 502 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 EPHA7Q15375 998 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 POTEBQ6S5H4 581 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 N4BP2L2Q92802 583 aaPredicted RBP14.9□□□□□ -0.02
PAX6-280ENST00000640872 ZNF317Q96PQ6 595 aaPredicted RBP14.9□□□□□ -0.02
PAX6-280ENST00000640872 TRIM51Q9BSJ1 452 aa14.9□□□□□ -0.02
PAX6-280ENST00000640872 ARMCX3Q9UH62 379 aaPredicted RBP14.9□□□□□ -0.02
PAX6-280ENST00000640872 CAND2O75155 1236 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 LDHCP07864 332 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 RFC4P35249 363 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 CASP5P51878 434 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 MRPL12P52815 198 aaKnown RBP14.89□□□□□ -0.03
PAX6-280ENST00000640872 ASPRV1Q53RT3 343 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 ARSHQ5FYA8 562 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 DAAM2Q86T65 1068 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 OLIG1Q8TAK6 271 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 FMO2Q99518 471 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 PNMA2Q9UL42 364 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 ATP8A1Q9Y2Q0 1164 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 NR2E1Q9Y466 385 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 PITPNM2Q9BZ72 1349 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 PPP1R11O60927 126 aaPredicted RBP14.89□□□□□ -0.03
PAX6-280ENST00000640872 TRIM37O94972 964 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 NUDT17P0C025 328 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 SNHG28P0DPA3 235 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 GCFC2P16383 781 aaKnown RBP14.89□□□□□ -0.03
PAX6-280ENST00000640872 BTDP43251 543 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 SCLT1Q96NL6 688 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 ZDHHC18Q9NUE0 388 aa14.89□□□□□ -0.03
PAX6-280ENST00000640872 PLIN4Q96Q06 1357 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 CCT8L1PA6NM43 557 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 ATP2C2O75185 946 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 FGGP02679 453 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 SLC12A3P55017 1021 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 PTENP60484 403 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 TRAPPC3LQ5T215 181 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
PAX6-280ENST00000640872 VPS36Q86VN1 386 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 HOOK3Q86VS8 718 aa14.88□□□□□ -0.03
PAX6-280ENST00000640872 CCDC197Q8NCU1 140 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms