RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 AP3B2Q13367 1082 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 CCDC38Q502W7 563 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 SCARA3Q6AZY7 606 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-220ENST00000639841 C7orf61Q8IZ16 206 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 ZMAT2Q96NC0 199 aaKnown RBP8.5□□□□□ -1.05
NECAP1-220ENST00000639841 TTLL2Q9BWV7 592 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 UNC45AQ9H3U1 944 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 ATP6V0A4Q9HBG4 840 aa8.5□□□□□ -1.05
NECAP1-220ENST00000639841 TOPORSQ9NS56 1045 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-220ENST00000639841 PXDNLA1KZ92 1463 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 CNTNAP4Q9C0A0 1308 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 GOLIM4O00461 696 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 NCK2O43639 380 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 RARAP10276 462 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 KRT20P35900 424 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 GPR3P46089 330 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 TMEM201Q5SNT2 666 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 C6orf118Q5T5N4 469 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 MAP1SQ66K74 1059 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-220ENST00000639841 SWSAP1Q6NVH7 229 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 HSCBQ8IWL3 235 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 PLPPR2Q96GM1 343 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 SLC6A18Q96N87 628 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 TESK2Q96S53 571 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
NECAP1-220ENST00000639841 FAM170AA1A519 330 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 ERVV-2B6SEH9 535 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 TISP43B9A030 160 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 B9A039 149 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 GAS7O60861 476 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 TNFSF4P23510 183 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 SOX18P35713 384 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 SCAND1P57086 179 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 KRT78Q8N1N4 520 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 MSL3Q8N5Y2 521 aaKnown RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 JADE3Q92613 823 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 SLC5A5Q92911 643 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 CHCHD6Q9BRQ6 235 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 ZCCHC17Q9NP64 241 aaKnown RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 DMRT3Q9NQL9 472 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 H2AFY2Q9P0M6 372 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 BRCA1P38398 1863 aaKnown RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 A0A1W2PNR3 127 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 FAM227AF5H4B4 570 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 FYB1O15117 783 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 ZBTB48P10074 688 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 VEGFAP15692 232 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 GPC1P35052 558 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 PCDH1Q08174 1060 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 TRAPPC3LQ5T215 181 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 DDX53Q86TM3 631 aaKnown RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 GRAMD1CQ8IYS0 662 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 KIAA0319LQ8IZA0 1049 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 BVESQ8NE79 360 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 ADAMTS18Q8TE60 1221 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 PLEKHA5Q9HAU0 1116 aa8.48□□□□□ -1.05
NECAP1-220ENST00000639841 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-220ENST00000639841 COL5A3P25940 1745 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-220ENST00000639841 KDRP35968 1356 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 SPATA31C2B4DYI2 1134 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 EIF3FO00303 357 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-220ENST00000639841 CYP27B1O15528 508 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 POU2F2P09086 479 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 HOXD8P13378 290 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-220ENST00000639841 PEX2P28328 305 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
NECAP1-220ENST00000639841 NEXNQ0ZGT2 675 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 CREB3L3Q68CJ9 461 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 C4orf50Q6ZRC1 276 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 NBPF11Q86T75 865 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 SLC30A5Q8TAD4 765 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 CYP26B1Q9NR63 512 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 TLR7Q9NYK1 1049 aaKnown RBP8.47□□□□□ -1.05
NECAP1-220ENST00000639841 NKIRAS2Q9NYR9 191 aa8.47□□□□□ -1.05
NECAP1-220ENST00000639841 PPARGC1AQ9UBK2 798 aaKnown RBP8.47□□□□□ -1.05
NECAP1-220ENST00000639841 B4E171 279 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 SLITRK5O94991 958 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 MMP10P09238 476 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 KCNQ4P56696 695 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 CCINQ13939 588 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 KIF22Q14807 665 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 ACAP2Q15057 778 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 DPP9Q86TI2 863 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 TMTC1Q8IUR5 882 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 PIGBQ92521 554 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 USP13Q92995 863 aaPredicted RBP8.46□□□□□ -1.05
NECAP1-220ENST00000639841 C1orf159Q96HA4 380 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 TMEM169Q96HH4 297 aa8.46□□□□□ -1.05
NECAP1-220ENST00000639841 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms