RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 CNOT7Q9UIV1 285 aaKnown RBP9.53□□□□□ -0.88
CHRNA7-219ENST00000636709 INTUQ9ULD6 942 aa9.53□□□□□ -0.88
CHRNA7-219ENST00000636709 GUCY2DQ02846 1103 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 C8orf34Q49A92 452 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 ZNF274Q96GC6 653 aaPredicted RBP9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 FANCLQ9NW38 375 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 GABBR1Q9UBS5 961 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 EIF3CLB5ME19 914 aaKnown RBP9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 M0QYV0 167 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 SLC16A4O15374 487 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 ANKRD40Q6AI12 368 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 CROCCP2Q86T23 111 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 TSC1Q92574 1164 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 ULK4Q96C45 1275 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 USP28Q96RU2 1077 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 EIF3CQ99613 913 aaKnown RBP9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 EPS15L1Q9UBC2 864 aa9.52□□□□□ -0.88
CHRNA7-219ENST00000636709 KIAA0556O60303 1618 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 MAP3K13O43283 966 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 SLCO1A2P46721 670 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 MXI1P50539 228 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 VMP1Q96GC9 406 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 GINM1Q9NU53 330 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 POU5F1BQ06416 359 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 EXOC4Q96A65 974 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 ZFYVE19Q96K21 471 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 PUS7LQ9H0K6 701 aaKnown RBP9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 AOX1Q06278 1338 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 PBRM1Q86U86 1689 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 DYNC1LI2O43237 492 aaPredicted RBP9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 CENPAP49450 140 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 CLNS1AP54105 237 aaKnown RBP9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 TNFAIP2Q03169 654 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 SURF1Q15526 300 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 CCDC138Q96M89 665 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 SYTL2Q9HCH5 934 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 MRPL47Q9HD33 250 aaKnown RBP9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 PARD3Q8TEW0 1356 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 TMTC3Q6ZXV5 915 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 TRPA1O75762 1119 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 RALAP11233 206 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 SYTL3Q4VX76 610 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 CCDC38Q502W7 563 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 TCP11X2Q5H9J9 407 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 TAGAPQ8N103 731 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 MUC3BQ9H195 1237 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 STRIP2Q9ULQ0 834 aa9.52□□□□□ -0.89
CHRNA7-219ENST00000636709 RNF123Q5XPI4 1314 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 SUPT3HB4E1H0 165 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 NDUFB5O43674 189 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 PRKCQQ04759 706 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 NR5A1Q13285 461 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 GTF2H3Q13889 308 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 BTN2A2Q8WVV5 523 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 MAML1Q92585 1016 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 DHX38Q92620 1227 aaKnown RBP9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 TSPYL2Q9H2G4 693 aaPredicted RBP9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 BHMT2Q9H2M3 363 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 TMCC1O94876 653 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 PLCG1P19174 1290 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 OR1G1P47890 313 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 LMNB2Q03252 620 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 POLR3FQ9H1D9 316 aaPredicted RBP9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 GTSE1Q9NYZ3 720 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 SNAP23O00161 211 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 KITP10721 976 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 JAK3P52333 1124 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 BBS9Q3SYG4 887 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 PPHLN1Q8NEY8 458 aaKnown RBP9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 ZMYND10O75800 440 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 FTCDO95954 541 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 RARBP10826 455 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 IFNA8P32881 189 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 ADD2P35612 726 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 WASHC5Q12768 1159 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 SLFN12LQ6IEE8 588 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP17L6PQ6QN14 398 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 TADA2BQ86TJ2 420 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 DCUN1D1Q96GG9 259 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 C6orf203Q9P0P8 240 aaPredicted RBP9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USH1CQ9Y6N9 552 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 TMEM270Q6UE05 265 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 RAB42Q8N4Z0 105 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
CHRNA7-219ENST00000636709 EMILIN3Q9NT22 766 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms