RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SNX29Q8TEQ0 813 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 ASIC4Q96FT7 647 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 TMEM87BQ96K49 555 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 BACH2Q9BYV9 841 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 LRRIQ4A6NIV6 560 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 IKBKBO14920 756 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 PRPSAP2O60256 369 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 TBC1D4O60343 1298 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 HOXD10P28358 340 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 KCTD2Q14681 263 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 GSTA3Q16772 222 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 FBXO42Q6P3S6 717 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 KRT27Q7Z3Y8 459 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 ARHGAP18Q8N392 663 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 BICC1Q9H694 974 aaKnown RBP6.42□□□□□ -1.38
SCN1A-212ENST00000636194 NSD3Q9BZ95 1437 aa6.42□□□□□ -1.38
SCN1A-212ENST00000636194 KPNA7A9QM74 516 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TOM1L1O75674 476 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 S100A1P23297 94 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TRADDQ15628 312 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 GRAMD1BQ3KR37 738 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 NEK10Q6ZWH5 1172 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 PEG10Q86TG7 708 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 POMGNT2Q8NAT1 580 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SLC7A3Q8WY07 619 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 OLFM3Q96PB7 478 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 FANCEQ9HB96 536 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 FIS1Q9Y3D6 152 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SOX6P35712 828 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 ARHGDIBP52566 201 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 RPL19P84098 196 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TRMT44Q8IYL2 757 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 KBTBD3Q8NAB2 608 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 PPP1R2P1Q96PQ5 205 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MAPK13O15264 365 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MPOP05164 745 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 ICA1Q05084 483 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SV2CQ496J9 727 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 ARHGAP17Q68EM7 881 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 NSMFQ6X4W1 530 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TRPM8Q7Z2W7 1104 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TAF8Q7Z7C8 310 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CLYBLQ8N0X4 340 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MAML1Q92585 1016 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CLCC1Q96S66 551 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 PRRG3Q9BZD7 231 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 ATPIF1Q9UII2 106 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 NSD2O96028 1365 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TDRD9Q8NDG6 1382 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 EHBP1L1Q8N3D4 1523 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 BMP10O95393 424 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 DLATP10515 647 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 DARSP14868 501 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 EFTUD2Q15029 972 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MAPRE2Q15555 327 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SGO2Q562F6 1265 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 BMP2KLQ5H9B9 411 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TBC1D9BQ66K14 1250 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 C2CD5Q86YS7 1000 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 DPP10Q8N608 796 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SYMPKQ92797 1274 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SNRKQ9NRH2 765 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 PA2G4Q9UQ80 394 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 GRM8O00222 908 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 LCA5LO95447 670 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 IL10P22301 178 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TRAP1Q12931 704 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CDC37Q16543 378 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MIS18BP1Q6P0N0 1132 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 DPP8Q6V1X1 898 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SH3GL1Q99961 368 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 TEKT3Q9BXF9 490 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MAGEF1Q9HAY2 307 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 NMRK1Q9NWW6 199 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SCN8AQ9UQD0 1980 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 AP3B1O00203 1094 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CFBP00751 764 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 GCLCP48506 637 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 MAPKAPK2P49137 400 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CDR2LQ86X02 465 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CAPS2Q9BXY5 557 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 GCOM2Q9BZD3 368 aaPredicted RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 PRKD2Q9BZL6 878 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 C10orf88Q9H8K7 445 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 ABT1Q9ULW3 272 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 RSPH10B2B2RC85 870 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 KIF28PB7ZC32 967 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 KCNK3O14649 394 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 COBLO75128 1261 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 RSPH10BP0C881 870 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 GJA1P17302 382 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 AP2B1P63010 937 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 NSUN2Q08J23 767 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 CHRNA2Q15822 529 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 KLHL12Q53G59 568 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 LRRC39Q96DD0 335 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms