RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 SREBF1P36956 1147 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 KLRC3Q07444 240 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 DPY19L2P1Q6NXN4 242 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 H2AFVQ71UI9 128 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 CRYGNQ8WXF5 182 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 EIF2AK1Q9BQI3 630 aaKnown RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 RUSC1Q9BVN2 902 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 AP1M1Q9BXS5 423 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 DBNDD1Q9H9R9 158 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 PLAAQ9Y263 795 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 QSER1Q2KHR3 1735 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 NDUFAB1O14561 156 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 GFPT2O94808 682 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 CLSTN1O94985 981 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 PRKCIP41743 596 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 CEP85LQ5SZL2 805 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 SYDE2Q5VT97 1194 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 GJB7Q6PEY0 223 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 DAAM2Q86T65 1068 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 MYCT1Q8N699 235 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 PIK3R5Q8WYR1 880 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 LENG9Q96B70 501 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 ISCUQ9H1K1 167 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 CENPHQ9H3R5 247 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 RGL1Q9NZL6 768 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 TMEM59LQ9UK28 342 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
PSPC1-207ENST00000635251 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 FAM169AQ9Y6X4 670 aa11.69□□□□□ -0.54
PSPC1-207ENST00000635251 A0A087WUV0 522 aaPredicted RBP11.68□□□□□ -0.54
PSPC1-207ENST00000635251 VGLL3A8MV65 326 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 KRIT1O00522 736 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 EYA4O95677 639 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 FERP16591 822 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 NR1D1P20393 614 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 STAT1P42224 750 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 KCNA1Q09470 495 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 CTTNQ14247 550 aaKnown RBP11.68□□□□□ -0.54
PSPC1-207ENST00000635251 BMT2Q1RMZ1 405 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 ABCB5Q2M3G0 1257 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 KDM7AQ6ZMT4 941 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 CD302Q8IX05 232 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 SYCE1Q8N0S2 351 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 METTL13Q8N6R0 699 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 LRRC57Q8N9N7 239 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 ACTRT1Q8TDG2 376 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 PIGOQ8TEQ8 1089 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 GJD4Q96KN9 370 aaPredicted RBP11.68□□□□□ -0.54
PSPC1-207ENST00000635251 RNPC3Q96LT9 517 aaKnown RBP11.68□□□□□ -0.54
PSPC1-207ENST00000635251 ZDHHC15Q96MV8 337 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 BCAS3Q9H6U6 928 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 SIX2Q9NPC8 291 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 NOC2LQ9Y3T9 749 aaKnown RBP11.68□□□□□ -0.54
PSPC1-207ENST00000635251 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 LTBP1Q14766 1721 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 ATAD5Q96QE3 1844 aa11.68□□□□□ -0.54
PSPC1-207ENST00000635251 GREB1LQ9C091 1923 aaPredicted RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 CHMP2AO43633 222 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 NDUFB10O96000 172 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 GAP43P17677 238 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 ANXA13P27216 316 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 HSPA9P38646 679 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 ERVK-9P63128 1117 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 CUL1Q13616 776 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 TPH2Q8IWU9 490 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 FAM186BQ8IYM0 893 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 PROCA1Q8NCQ7 364 aaPredicted RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 CYP2W1Q8TAV3 490 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 SCFD2Q8WU76 684 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 ATP6V1G3Q96LB4 118 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 DDX47Q9H0S4 455 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 FBXL5Q9UKA1 691 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 VAV3Q9UKW4 847 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 EML1O00423 815 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 SART1O43290 800 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 BMP3P12645 472 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 NPR1P16066 1061 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 NMT1P30419 496 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 JAM2P57087 298 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 GUCY1A3Q02108 690 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 MEX3CQ5U5Q3 659 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 RINT1Q6NUQ1 792 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 TADA2BQ86TJ2 420 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 SIAH1Q8IUQ4 282 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 LRRC45Q96CN5 670 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms