RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PCDHA2Q9Y5H9 948 aa7.89□□□□□ -1.15
BRCA1-230ENST00000634433 TRAF5O00463 557 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 CETN3O15182 167 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 EGFRP00533 1210 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ALAS1P13196 640 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TAL1P17542 331 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 CASQ1P31415 396 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ZBED6P86452 979 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 EDRF1Q3B7T1 1238 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ARSHQ5FYA8 562 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ODR4Q5SWX8 454 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 C1QTNF12Q5T7M4 302 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 XRRA1Q6P2D8 792 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TOGARAM2Q6ZUX3 1019 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 STXBP4Q6ZWJ1 553 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 GPC2Q8N158 579 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 CYP2W1Q8TAV3 490 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 UIMC1Q96RL1 719 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 DNAJC7Q99615 494 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 EDEM3Q9BZQ6 932 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 NDST4Q9H3R1 872 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 RPAP3Q9H6T3 665 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ADGRG1Q9Y653 693 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ZNF536O15090 1300 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 RPTORQ8N122 1335 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TTC26A0AVF1 554 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 IPO5O00410 1097 aaKnown RBP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 CALUO43852 315 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 SLU7O95391 586 aaKnown RBP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 VCAM1P19320 739 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 NDUFV2P19404 249 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 OAZ1P54368 228 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 PPP2R3AQ06190 1150 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 SPP2Q13103 211 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 MTMR2Q13614 643 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TUBB2AQ13885 445 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 LRRC41Q15345 812 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 CCDC40Q4G0X9 1142 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 MIIPQ5JXC2 388 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ANGEL2Q5VTE6 544 aaKnown RBP7.88□□□□□ -1.15
BRCA1-230ENST00000634433 PCNX4Q63HM2 1172 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TRIM65Q6PJ69 517 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 EGFL6Q8IUX8 553 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TPH2Q8IWU9 490 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 CLEC4DQ8WXI8 215 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 ERO1AQ96HE7 468 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 C12orf42Q96LP6 360 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 WRNIP1Q96S55 665 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TUBB2BQ9BVA1 445 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 GPRC5DQ9NZD1 345 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 SEL1LQ9UBV2 794 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 DNAI1Q9UI46 699 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 FAM184BQ9ULE4 1060 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
BRCA1-230ENST00000634433 EML1O00423 815 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 KIF5CO60282 957 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 SLITRK3O94933 977 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 PTPRAP18433 802 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 RPL13P26373 211 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 CYLC1P35663 651 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 PSMC6P62333 389 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 KRT83P78385 493 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 TKFCQ3LXA3 575 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 ZCWPW2Q504Y3 356 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 RAD9BQ6WBX8 426 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 LRRC55Q6ZSA7 311 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 CCDC170Q8IYT3 715 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 CPXCR1Q8N123 301 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 TSC1Q92574 1164 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 DYDC2Q96IM9 177 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 MUC3BQ9H195 1237 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 BHMT2Q9H2M3 363 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 L2HGDHQ9H9P8 463 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 RAVER2Q9HCJ3 691 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.87□□□□□ -1.153e-6■■■■■ 87.3
BRCA1-230ENST00000634433 TBC1D22BQ9NU19 505 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 TMOD4Q9NZQ9 345 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 MYO1AQ9UBC5 1043 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 NPHP3-ACAD11A0A0J9YXS1 232 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 PDXKO00764 312 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 FAM13AO94988 1023 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 IPO7O95373 1038 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 P4HBP07237 508 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 VAMP1P23763 118 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 GNG11P61952 73 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 CDK17Q00537 523 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 CYP4A11Q02928 519 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 ADAM9Q13443 819 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 KNOP1Q1ED39 458 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 NOL9Q5SY16 702 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 RINT1Q6NUQ1 792 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 ZC3H3Q8IXZ2 948 aaKnown RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 SYTL5Q8TDW5 730 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-230ENST00000634433 SCFD1Q8WVM8 642 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 SCYL1Q96KG9 808 aa7.87□□□□□ -1.15
BRCA1-230ENST00000634433 TRERF1Q96PN7 1200 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms