RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 CIITAP33076 1130 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 CCT2P78371 535 aaKnown RBP18.81■□□□□ 0.6
PDCD6-214ENST00000628729 SETQ01105 290 aaPredicted RBP18.81■□□□□ 0.6
PDCD6-214ENST00000628729 KRT76Q01546 638 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 PAK2Q13177 524 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 CAMK1Q14012 370 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 BTG3Q14201 252 aaPredicted RBP18.81■□□□□ 0.6
PDCD6-214ENST00000628729 PRR16Q569H4 304 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 FAM160B1Q5W0V3 765 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 PPP1R16BQ96T49 567 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 SLC26A6Q9BXS9 759 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 NSUN3Q9H649 340 aaKnown RBP18.81■□□□□ 0.6
PDCD6-214ENST00000628729 ERVK-5Q9HDB9 667 aa18.81■□□□□ 0.6
PDCD6-214ENST00000628729 M0QZ92 97 aa18.8■□□□□ 0.6
PDCD6-214ENST00000628729 CSPG5O95196 566 aa18.8■□□□□ 0.6
PDCD6-214ENST00000628729 ZNF746Q6NUN9 644 aaPredicted RBP18.8■□□□□ 0.6
PDCD6-214ENST00000628729 MIS18BP1Q6P0N0 1132 aa18.8■□□□□ 0.6
PDCD6-214ENST00000628729 NPAS4Q8IUM7 802 aa18.8■□□□□ 0.6
PDCD6-214ENST00000628729 CCDC12Q8WUD4 166 aaPredicted RBP18.8■□□□□ 0.6
PDCD6-214ENST00000628729 NOC2LQ9Y3T9 749 aaKnown RBP18.8■□□□□ 0.6
PDCD6-214ENST00000628729 MAFBQ9Y5Q3 323 aaPredicted RBP18.8■□□□□ 0.6
PDCD6-214ENST00000628729 REC8O95072 547 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 DNAJB1P25685 340 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 LTBRP36941 435 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 PAN2Q504Q3 1202 aaKnown RBP18.79■□□□□ 0.6
PDCD6-214ENST00000628729 TNPO1Q92973 898 aaKnown RBP18.79■□□□□ 0.6
PDCD6-214ENST00000628729 GJA10Q969M2 543 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 PABPC5Q96DU9 382 aaKnown RBP18.79■□□□□ 0.6
PDCD6-214ENST00000628729 LARP6Q9BRS8 491 aaKnown RBP18.79■□□□□ 0.6
PDCD6-214ENST00000628729 C11orf84Q9BUA3 381 aaPredicted RBP18.79■□□□□ 0.6
PDCD6-214ENST00000628729 FTHL17Q9BXU8 183 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 C11orf16Q9NQ32 467 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 GINS2Q9Y248 185 aa18.79■□□□□ 0.6
PDCD6-214ENST00000628729 ZNF862O60290 1169 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 MMP1P03956 469 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 RB1P06400 928 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 GNA11P29992 359 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.64e-8■■■■□ 22.3
PDCD6-214ENST00000628729 HYAL1Q12794 435 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 NPY5RQ15761 445 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 UGCGQ16739 394 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 KIZQ2M2Z5 673 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 ZNF484Q5JVG2 852 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 PTCRAQ6ISU1 281 aaPredicted RBP18.78■□□□□ 0.6
PDCD6-214ENST00000628729 RUFY3Q7L099 469 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 TRMT1LQ7Z2T5 733 aaKnown RBP18.78■□□□□ 0.6
PDCD6-214ENST00000628729 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 SMAP1Q8IYB5 467 aaPredicted RBP18.78■□□□□ 0.6
PDCD6-214ENST00000628729 CMTR2Q8IYT2 770 aaKnown RBP18.78■□□□□ 0.6
PDCD6-214ENST00000628729 NME8Q8N427 588 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 ALG13Q9NP73 1137 aaKnown RBP18.78■□□□□ 0.6
PDCD6-214ENST00000628729 TBC1D22BQ9NU19 505 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 HCSTQ9UBK5 93 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 GABBR1Q9UBS5 961 aa18.78■□□□□ 0.6
PDCD6-214ENST00000628729 GRXCR2A6NFK2 248 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 MSH4O15457 936 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 GPR32O75388 356 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 VTNP04004 478 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 PSMA5P28066 241 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 CLCN3P51790 818 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 DLX2Q07687 328 aaPredicted RBP18.77■□□□□ 0.6
PDCD6-214ENST00000628729 NFX1Q12986 1120 aaKnown RBP18.77■□□□□ 0.6
PDCD6-214ENST00000628729 CTC1Q2NKJ3 1217 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 MCTP2Q6DN12 878 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 FAM228AQ86W67 206 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 CCDC148Q8NFR7 591 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 BBXQ8WY36 941 aaPredicted RBP18.77■□□□□ 0.6
PDCD6-214ENST00000628729 AIFM3Q96NN9 605 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 OSMRQ99650 979 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 UPF3BQ9BZI7 483 aaKnown RBP18.77■□□□□ 0.6
PDCD6-214ENST00000628729 LMAN2LQ9H0V9 348 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 RWDD3Q9Y3V2 267 aa18.77■□□□□ 0.6
PDCD6-214ENST00000628729 M0R2N6 131 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 TBX10O75333 385 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 RPS6KA5O75582 802 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 ITGB1P05556 798 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 SARSP49591 514 aaKnown RBP18.76■□□□□ 0.59
PDCD6-214ENST00000628729 AKAP17AQ02040 695 aaKnown RBP18.76■□□□□ 0.59
PDCD6-214ENST00000628729 CKAP2LQ8IYA6 745 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 CLDND1Q9NY35 253 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 ST3GAL5Q9UNP4 418 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 PLAGL2Q9UPG8 496 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 PCDHA10Q9Y5I2 948 aa18.76■□□□□ 0.59
PDCD6-214ENST00000628729 TRIOO75962 3097 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 LINC01565O15544 149 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 PSAPP07602 524 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 IBSPP21815 317 aaPredicted RBP18.75■□□□□ 0.59
PDCD6-214ENST00000628729 IRS1P35568 1242 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 ADGRD2Q7Z7M1 963 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 LRRC71Q8N4P6 559 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 BICD2Q8TD16 824 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 SLC5A5Q92911 643 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 P2RX5Q93086 422 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 ADAM2Q99965 735 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 PLVAPQ9BX97 442 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 C1QTNF1Q9BXJ1 281 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 UNC45AQ9H3U1 944 aa18.75■□□□□ 0.59
PDCD6-214ENST00000628729 SH3GLB2Q9NR46 395 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms