RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GTPBP6O43824 516 aaPredicted RBP14.24□□□□□ -0.13
PNKP-217ENST00000625216 CYP3A7P24462 503 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 U2AF2P26368 475 aaKnown RBP eCLIP14.24□□□□□ -0.134e-8■□□□□ 9.6
PNKP-217ENST00000625216 KRT2P35908 639 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 MRPS6P82932 125 aaKnown RBP14.24□□□□□ -0.13
PNKP-217ENST00000625216 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
PNKP-217ENST00000625216 Q4G0T1 1027 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 FBXO47Q5MNV8 452 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 MOXD1Q6UVY6 613 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 BRAPQ7Z569 592 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 CCDC60Q8IWA6 550 aaPredicted RBP14.24□□□□□ -0.13
PNKP-217ENST00000625216 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 ARNTL2Q8WYA1 636 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 CDY2AQ9Y6F7 541 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 DDX11L8A8MPP1 907 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 WDR64B1ANS9 1081 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 MSH4O15457 936 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 EDIL3O43854 480 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 GHRP10912 638 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 KLRC1P26715 233 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 SFNP31947 248 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 ERVK-21P61565 698 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 LPIN1Q14693 890 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 NONOQ15233 471 aaKnown RBP eCLIP14.23□□□□□ -0.13
PNKP-217ENST00000625216 SAFBQ15424 915 aaKnown RBP eCLIP14.23□□□□□ -0.13
PNKP-217ENST00000625216 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 MTHFD1LQ6UB35 978 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 TSHZ1Q6ZSZ6 1077 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 KRT25Q7Z3Z0 450 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 TMCO2Q7Z6W1 182 aaPredicted RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 CKAP2LQ8IYA6 745 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 BBXQ8WY36 941 aaPredicted RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 SLC5A5Q92911 643 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 TGS1Q96RS0 853 aaKnown RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 OSBPL7Q9BZF2 842 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 FOXP1Q9H334 677 aaPredicted RBP14.23□□□□□ -0.13
PNKP-217ENST00000625216 LMCD1Q9NZU5 365 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 CEP131Q9UPN4 1083 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 CHD7Q9P2D1 2997 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 UNC80Q8N2C7 3258 aa14.23□□□□□ -0.13
PNKP-217ENST00000625216 KDM3AQ9Y4C1 1321 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
PNKP-217ENST00000625216 LCHNA4D1U4 455 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 LINC01553A4QN01 128 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 ARHGEF15O94989 841 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 KRT85P78386 507 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
PNKP-217ENST00000625216 FAM117BQ6P1L5 589 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 NOSTRINQ8IVI9 506 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 RDM1Q8NG50 284 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
PNKP-217ENST00000625216 TRAPPC12Q8WVT3 735 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 FAM167AQ96KS9 214 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 MBOAT7Q96N66 472 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 SAMD11Q96NU1 681 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 USP28Q96RU2 1077 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 TEKT3Q9BXF9 490 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 FTHL17Q9BXU8 183 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 CELF4Q9BZC1 486 aaKnown RBP14.22□□□□□ -0.13
PNKP-217ENST00000625216 FAM49AQ9H0Q0 323 aaPredicted RBP14.22□□□□□ -0.13
PNKP-217ENST00000625216 CERS4Q9HA82 394 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 DISC1Q9NRI5 854 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 LMBRD1Q9NUN5 540 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 SAMM50Q9Y512 469 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 TRPV2Q9Y5S1 764 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 EYSQ5T1H1 3165 aa14.22□□□□□ -0.13
PNKP-217ENST00000625216 ENPP3O14638 875 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 MAGEB2O15479 319 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 GAS7O60861 476 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 ATP4AP20648 1035 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 JAK3P52333 1124 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 NBR1Q14596 966 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 ODR4Q5SWX8 454 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 LRCH2Q5VUJ6 765 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 ATXN2LQ8WWM7 1075 aaKnown RBP14.21□□□□□ -0.13
PNKP-217ENST00000625216 PPM1EQ8WY54 764 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 SYMPKQ92797 1274 aaKnown RBP14.21□□□□□ -0.13
PNKP-217ENST00000625216 UIMC1Q96RL1 719 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 YME1L1Q96TA2 773 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.13
PNKP-217ENST00000625216 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 NRBP2Q9NSY0 501 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
PNKP-217ENST00000625216 GABBR1Q9UBS5 961 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 MTCH2Q9Y6C9 303 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 PRUNE2Q8WUY3 3088 aa14.21□□□□□ -0.13
PNKP-217ENST00000625216 DOCK5Q9H7D0 1870 aa14.21□□□□□ -0.14
PNKP-217ENST00000625216 MYO9BQ13459 2157 aa14.2□□□□□ -0.14
PNKP-217ENST00000625216 CCDC194A0A1B0GVG4 234 aa14.2□□□□□ -0.14
PNKP-217ENST00000625216 GOLGA6L22H0YM25 854 aa14.2□□□□□ -0.14
PNKP-217ENST00000625216 RFXAPO00287 272 aa14.2□□□□□ -0.14
PNKP-217ENST00000625216 PSMD10O75832 226 aa14.2□□□□□ -0.14
PNKP-217ENST00000625216 GCFC2P16383 781 aaKnown RBP14.2□□□□□ -0.14
PNKP-217ENST00000625216 GRB10Q13322 594 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms