RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 ZPBPQ9BS86 351 aa9.47□□□□□ -0.89
CDKL5-206ENST00000623610 OSBPL7Q9BZF2 842 aa9.47□□□□□ -0.89
CDKL5-206ENST00000623610 USP6P35125 1406 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 AFF2P51816 1311 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 NDC80O14777 642 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 SLITRK5O94991 958 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 ZSCAN22P10073 491 aaPredicted RBP9.46□□□□□ -0.89
CDKL5-206ENST00000623610 MCM4P33991 863 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 RPIAP49247 311 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 ATP1A2P50993 1020 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 CCNHP51946 323 aaPredicted RBP9.46□□□□□ -0.89
CDKL5-206ENST00000623610 DEUP1Q05D60 604 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 PRKG1Q13976 671 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 COG2Q14746 738 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 CLPPQ16740 277 aaPredicted RBP9.46□□□□□ -0.89
CDKL5-206ENST00000623610 BOLA3Q53S33 107 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 MCTP1Q6DN14 999 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 DGLUCYQ7Z3D6 616 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 CCDC170Q8IYT3 715 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 C2orf69Q8N8R5 385 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 GALNT6Q8NCL4 622 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 NGLY1Q96IV0 654 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 PLVAPQ9BX97 442 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 OCEL1Q9H607 264 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 AGO4Q9HCK5 861 aaKnown RBP9.46□□□□□ -0.89
CDKL5-206ENST00000623610 PLSCR4Q9NRQ2 329 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 PCDHB9Q9Y5E1 797 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 PARP3Q9Y6F1 533 aa9.46□□□□□ -0.89
CDKL5-206ENST00000623610 ABCA3Q99758 1704 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 CAPN9O14815 690 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 FAM153BP0C7A2 387 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 DCAF7P61962 342 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 RELQ04864 619 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-206ENST00000623610 RCN1Q15293 331 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 METTL11BQ5VVY1 283 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 RNF219Q5W0B1 726 aaPredicted RBP9.46□□□□□ -0.9
CDKL5-206ENST00000623610 SLC30A6Q6NXT4 461 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 ANGPTL8Q6UXH0 198 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 LRRTM3Q86VH5 581 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 COL26A1Q96A83 441 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 CHFRQ96EP1 664 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 COG3Q96JB2 828 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 TIGD1Q96MW7 591 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 PIGSQ96S52 555 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 DHRS4Q9BTZ2 278 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 SMOC1Q9H4F8 434 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 HOMER3Q9NSC5 361 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 AKAP12Q02952 1782 aa9.46□□□□□ -0.9
CDKL5-206ENST00000623610 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 GRIN3BO60391 1043 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 GJB6O95452 261 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 DDX58O95786 925 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 HSPA6P17066 643 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 TFEBP19484 476 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 KRT9P35527 623 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 SULT1E1P49888 294 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 CAPRIN2Q6IMN6 1127 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 TRAF7Q6Q0C0 670 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 ESX1Q8N693 406 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 TRIML2Q8N7C3 387 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 ANKRD52Q8NB46 1076 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 TSEN2Q8NCE0 465 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 UCMAQ8WVF2 138 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 ZNF845Q96IR2 970 aaPredicted RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 CCDC138Q96M89 665 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 WDR24Q96S15 920 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 TTLL2Q9BWV7 592 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 OSBPL10Q9BXB5 764 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 XAB2Q9HCS7 855 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 SIRT5Q9NXA8 310 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 MRPL11Q9Y3B7 192 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
CDKL5-206ENST00000623610 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
CDKL5-206ENST00000623610 BIN1O00499 593 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 S100A5P33763 92 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 ACTN2P35609 894 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 TERF2Q15554 542 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 KRT71Q3SY84 523 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 C5orf22Q49AR2 442 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 SMUG1Q53HV7 270 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 CENPQQ7L2Z9 268 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-206ENST00000623610 PHTF2Q8N3S3 785 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 ZSWIM2Q8NEG5 633 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 FBXO27Q8NI29 283 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 LRRC45Q96CN5 670 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 THOC1Q96FV9 657 aaKnown RBP9.44□□□□□ -0.9
CDKL5-206ENST00000623610 TMEM237Q96Q45 408 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 SLF1Q9BQI6 1058 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 GLT8D2Q9H1C3 349 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 ITM2CQ9NQX7 267 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 ACTR10Q9NZ32 417 aa9.44□□□□□ -0.9
CDKL5-206ENST00000623610 KCNH4Q9UQ05 1017 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms