RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 IGHMBP2P38935 993 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 RAD23BP54727 409 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 OXCT1P55809 520 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ATP2C1P98194 919 aaPredicted RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF844Q08AG5 666 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 BNIP1Q12981 228 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 LSAMPQ13449 338 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ITPK1Q13572 414 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 TSR1Q2NL82 804 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CCDC152Q4G0S7 254 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ODF2Q5BJF6 829 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM133BQ5BKY9 247 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 IFIT1BQ5T764 474 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF554Q86TJ5 538 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 RNF10Q8N5U6 811 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 KCNV2Q8TDN2 545 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 ASAP3Q8TDY4 903 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 STK32AQ8WU08 396 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 IRGQQ8WZA9 623 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CHP1Q99653 195 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CYP39A1Q9NYL5 469 aa8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 LARSQ9P2J5 1176 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 CNOT8Q9UFF9 292 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 RPL26L1Q9UNX3 145 aaKnown RBP8.14□□□□□ -1.11
TRIM49B-202ENST00000622138 RREB1Q92766 1687 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 GRID2IPA4D2P6 1211 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 MAGEA13PA6NCF6 341 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 SMAPO00193 183 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 CTNND1O60716 968 aaKnown RBP8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 UPP2O95045 317 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 OAS1P00973 400 aaKnown RBP8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 SERPINB4P48594 390 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 PLS1Q14651 629 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 PARP6Q2NL67 630 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 OLFML1Q6UWY5 402 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 SEPT14Q6ZU15 432 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 PIK3AP1Q6ZUJ8 805 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 CATIPQ7Z7H3 387 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 EXOC3L1Q86VI1 746 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 SAMD3Q8N6K7 520 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 SPIRE2Q8WWL2 714 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 FERMT2Q96AC1 680 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 TLCD1Q96CP7 247 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 MAML3Q96JK9 1138 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 PBKQ96KB5 322 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 GSDMAQ96QA5 445 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 THAP9Q9H5L6 903 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 EPB41L5Q9HCM4 733 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 GDAQ9Y2T3 454 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM205AQ6ZU69 1335 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 LAMB1P07942 1786 aa8.13□□□□□ -1.11
TRIM49B-202ENST00000622138 EIF4E1BA6NMX2 242 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 A8MUI8 341 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CETN3O15182 167 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 PEX11AO75192 247 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 LMNAP02545 664 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 TPBGLP0DKB5 382 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 ALOX15P16050 662 aaPredicted RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 HSD17B3P37058 310 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CD97P48960 835 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 COPB1P53618 953 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 MRPS25P82663 173 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 ADCY1Q08828 1119 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CUL1Q13616 776 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CLPPQ16740 277 aaPredicted RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 GSTA3Q16772 222 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 INF2Q27J81 1249 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CNPY1Q3B7I2 92 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM47AQ5JRC9 791 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 SPDYCQ5MJ68 293 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 RRAGBQ5VZM2 374 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 MYOCDQ8IZQ8 938 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 PHC3Q8NDX5 983 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CASKIN2Q8WXE0 1202 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 POLR3CQ9BUI4 534 aaPredicted RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 VPS16Q9H269 839 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 ABCF3Q9NUQ8 709 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 RHBDL2Q9NX52 303 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 NIP7Q9Y221 180 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 COL16A1Q07092 1604 aaPredicted RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 KIAA1551Q9HCM1 1747 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 A0A1W2PQC6 194 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 TRIM49BA6NDI0 452 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 GFPT2O94808 682 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 GLI1P08151 1106 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 TROVE2P10155 538 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 SKIP12755 728 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CCNB1P14635 433 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 KCNA3P22001 575 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 MCM7P33993 719 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CTNNA1P35221 906 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 GUCY2FP51841 1108 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CDK17Q00537 523 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 GUCY2DQ02846 1103 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 MUM1Q2TAK8 710 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CFAP221Q4G0U5 840 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms