RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ZNF571Q7Z3V5 609 aaPredicted RBP10.34□□□□□ -0.75
PDPN-212ENST00000621990 FAM160B2Q86V87 743 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
PDPN-212ENST00000621990 HDAC7Q8WUI4 952 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 WDR11Q9BZH6 1224 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 BCAS3Q9H6U6 928 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 PGAP2Q9UHJ9 254 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 FAN1Q9Y2M0 1017 aa10.34□□□□□ -0.75
PDPN-212ENST00000621990 MRPL11Q9Y3B7 192 aaKnown RBP10.34□□□□□ -0.75
PDPN-212ENST00000621990 ZMYND10O75800 440 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 CFBP00751 764 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 CXCR5P32302 372 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 PAFAH1B1P43034 410 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 CASP4P49662 377 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 GHRHRQ02643 423 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 CTTNQ14247 550 aaKnown RBP10.33□□□□□ -0.76
PDPN-212ENST00000621990 MUM1L1Q5H9M0 696 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 GBP6Q6ZN66 633 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 TMEM174Q8WUU8 243 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 DYDC2Q96IM9 177 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 STRA6Q9BX79 667 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 PARVGQ9HBI0 331 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 STIM2Q9P246 746 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 FEM1BQ9UK73 627 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 SHTN1A0MZ66 631 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 GUCY2CP25092 1073 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 HSD17B4P51659 736 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 EZH2Q15910 746 aaKnown RBP10.33□□□□□ -0.76
PDPN-212ENST00000621990 CCDC181Q5TID7 509 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 FAM83AQ86UY5 434 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 PIGOQ8TEQ8 1089 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 INPP4AQ96PE3 977 aaPredicted RBP10.33□□□□□ -0.76
PDPN-212ENST00000621990 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 PACSIN1Q9BY11 444 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 DMAC2Q9NW81 257 aa10.33□□□□□ -0.76
PDPN-212ENST00000621990 DMGDHQ9UI17 866 aaKnown RBP10.33□□□□□ -0.76
PDPN-212ENST00000621990 RPTORQ8N122 1335 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 AGPSO00116 658 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 GAS7O60861 476 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 CLSTN1O94985 981 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 FAM13AO94988 1023 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 BCRP11274 1271 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 PSMC2P35998 433 aaKnown RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 DLGAP5Q15398 846 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 ZNF720Q7Z2F6 126 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 TPH2Q8IWU9 490 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 RTKN2Q8IZC4 609 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 OLIG1Q8TAK6 271 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 RIT2Q99578 217 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 RBM12Q9NTZ6 932 aaKnown RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 CALCOCO1Q9P1Z2 691 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 WRAP73Q9P2S5 460 aaPredicted RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 NAGPAQ9UK23 515 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 MYH11P35749 1972 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 CLRN2A0PK11 232 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 C21orf2O43822 256 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 RPS6KA5O75582 802 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 PPP1R37O75864 691 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 GFPT2O94808 682 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 PTGER2P43116 358 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 TNNT3P45378 269 aaPredicted RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 ARID5AQ03989 594 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 DCAF17Q5H9S7 520 aaPredicted RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 EMBQ6PCB8 327 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 MYCT1Q8N699 235 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 LRRC57Q8N9N7 239 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 NEK9Q8TD19 979 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 CAVIN3Q969G5 261 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 ZBED3Q96IU2 234 aaPredicted RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 SPAG5Q96R06 1193 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 PSMB7Q99436 277 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDPN-212ENST00000621990 VPS33BQ9H267 617 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 UNC45AQ9H3U1 944 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 EHD2Q9NZN4 543 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 GCNT4Q9P109 453 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 AJAP1Q9UKB5 411 aaPredicted RBP10.32□□□□□ -0.76
PDPN-212ENST00000621990 INTUQ9ULD6 942 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 DAAM1Q9Y4D1 1078 aa10.32□□□□□ -0.76
PDPN-212ENST00000621990 A0A0A6YYK5 440 aaPredicted RBP10.31□□□□□ -0.76
PDPN-212ENST00000621990 RNF40O75150 1001 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 ZBTB48P10074 688 aaPredicted RBP10.31□□□□□ -0.76
PDPN-212ENST00000621990 NMT1P30419 496 aaKnown RBP10.31□□□□□ -0.76
PDPN-212ENST00000621990 CAP2P40123 477 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 NNTQ13423 1086 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 NIPA1Q7RTP0 329 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 SLC9A9Q8IVB4 645 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 GSPT2Q8IYD1 628 aaKnown RBP10.31□□□□□ -0.76
PDPN-212ENST00000621990 MS4A14Q96JA4 679 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 ZNF577Q9BSK1 485 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 GDF3Q9NR23 364 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 SMARCAL1Q9NZC9 954 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms