RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CHMP2AO43633 222 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 ZNF862O60290 1169 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 CD52P31358 61 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 ERVK-21P61565 698 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 GRB10Q13322 594 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 MOXD1Q6UVY6 613 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 NSUN7Q8NE18 718 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 ETNPPLQ8TBG4 499 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 SP7Q8TDD2 431 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 MTUS1Q9ULD2 1270 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 SQORQ9Y6N5 450 aa20.28■□□□□ 0.84
SCAMP4-213ENST00000621748 CCDC194A0A1B0GVG4 234 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 M0QZ92 97 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 SLC37A4O43826 429 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 LPXNO60711 386 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 C22orf31O95567 290 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 UGCGQ16739 394 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 LETM2Q2VYF4 491 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 EARS2Q5JPH6 523 aaKnown RBP20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 B3GNT9Q6UX72 402 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 MICALL1Q8N3F8 863 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 WASF1Q92558 559 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 TGS1Q96RS0 853 aaKnown RBP20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 CDHR5Q9HBB8 845 aa20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 DDX25Q9UHL0 483 aaKnown RBP20.27■□□□□ 0.84
SCAMP4-213ENST00000621748 KDM3AQ9Y4C1 1321 aa20.27■□□□□ 0.83
SCAMP4-213ENST00000621748 JAK2O60674 1132 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 SFNP31947 248 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 JAK3P52333 1124 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 PIK3AP1Q6ZUJ8 805 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 RTN4RL1Q86UN2 441 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 LINC01599Q8WXQ3 324 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 YME1L1Q96TA2 773 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 SUGCTQ9HAC7 445 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 PADI3Q9ULW8 664 aa20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 COL4A4P53420 1690 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-213ENST00000621748 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 OATP04181 439 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 NR5A1Q13285 461 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 MIER3Q7Z3K6 550 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 NEK8Q86SG6 692 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 GDPD5Q8WTR4 605 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 FAM167AQ96KS9 214 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 C17orf80Q9BSJ5 609 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 COL25A1Q9BXS0 654 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 GINS2Q9Y248 185 aa20.25■□□□□ 0.83
SCAMP4-213ENST00000621748 FAM205CA6NFA0 338 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 PRKCEQ02156 737 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 TMEM266Q2M3C6 531 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 PPP4R3AQ6IN85 833 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 METTL13Q8N6R0 699 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 RDM1Q8NG50 284 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 KIF2CQ99661 725 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 NRBP2Q9NSY0 501 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
SCAMP4-213ENST00000621748 CCNT1O60563 726 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 VTNP04004 478 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 PAK2Q13177 524 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 TMEM40Q8WWA1 233 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 TNFRSF25Q93038 417 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 PPP1R16BQ96T49 567 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 TMX1Q9H3N1 280 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 KCNMB3Q9NPA1 279 aa20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 NOC2LQ9Y3T9 749 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-213ENST00000621748 MAGEB2O15479 319 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 STBD1O95210 358 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 GCFC2P16383 781 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 KRT2P35908 639 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 CLCN3P51790 818 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 KIZQ2M2Z5 673 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 EFCAB12Q6NXP0 572 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 CRIPAKQ8N1N5 446 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 LINC01465Q8N7H1 131 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 FTHL17Q9BXU8 183 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 XIRP2A4UGR9 3374 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 NLRC5Q86WI3 1866 aa20.22■□□□□ 0.83
SCAMP4-213ENST00000621748 EML1O00423 815 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 GPR32O75388 356 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 RBM25P49756 843 aaKnown RBP20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 FOSBP53539 338 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 NFX1Q12986 1120 aaKnown RBP20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 TARBP2Q15633 366 aaKnown RBP20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 EPC2Q52LR7 807 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 LRRC71Q8N4P6 559 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 FBXO22Q8NEZ5 403 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 HAS1Q92839 578 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 FAM20AQ96MK3 541 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 OSMRQ99650 979 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 TSPYL2Q9H2G4 693 aaPredicted RBP20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 RC3H2Q9HBD1 1191 aaKnown RBP20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 VAV3Q9UKW4 847 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 COL4A6Q14031 1691 aa20.21■□□□□ 0.83
SCAMP4-213ENST00000621748 TMEM150BA6NC51 233 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 MGEA5O60502 916 aa20.2■□□□□ 0.82
SCAMP4-213ENST00000621748 RPS6KA5O75582 802 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms